CX298435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.161e-27 Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YCT + Q+PCA G+ Y+G GPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+W+WM R+ S ++Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 163 YCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.391e-27 Identity = 64/141 (45.39%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YCT + Q+PCA G+ Y+G GPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+W+WM R+ S +Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 163 YCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.041e-27 Identity = 64/141 (45.39%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YCT + Q+PCA G+ Y+G GPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+W+WM R+ S +Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 167 YCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDC 307
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 9.196e-27 Identity = 64/141 (45.39%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YCT + Q+PCA G+ Y+G GPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALW+WM R+ S+ ++ GFG ING ECG ++VQDR+ Y YC GV PG NL+C Sbjct: 169 YCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 309
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 9.196e-27 Identity = 63/141 (44.68%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YCT + Q+PCA G+ Y+G GPIQ++ N NY GRAIG D LN+P+ VA D +ISFK+A+W+WM R+ S +Q GFG ING ECG + ++VQDR+ Y YC GV PG NL+C Sbjct: 161 YCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 301
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 9.196e-27 Identity = 65/141 (46.10%), Postives = 82/141 (58.16%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YCT + Q+PCA G+ Y+G GPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALW+WM R+ SA ++ GFG ING ECG ++VQDR+ Y YC GV PG NL+C Sbjct: 174 YCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 314
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.049e-26 Identity = 63/141 (44.68%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC+ TPQ+PCA G+ YYG GPIQ++ N NY GRAIG D LN P+ VA D VISFK+ALW+WM R+ S+ + G+G ING ECG ++VQDR+ + YC GV G NL+C Sbjct: 169 YCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 309
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.049e-26 Identity = 63/141 (44.68%), Postives = 80/141 (56.74%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALN------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC+ TPQ+PCA G+ YYG GPIQ++ N NY GRAIG D LN P+ VA D VISFK+ALW+WM R+ S+ + G+G ING ECG ++VQDR+ + YC GV G NL+C Sbjct: 168 YCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 308
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.676e-26 Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR------YVHSALN---------------QGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC + ++PCA+GK YYG GPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALW+WM H + G+G ING ECG ++VQDR+ Y YC FG+ G NL+C Sbjct: 161 YCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDC 301
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.564e-26 Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC Q+ Q+PCA G+ YYG GPIQ++ N NY GRAIG + LN+P+ VA + V+SFK+A+W+WM R+ SA ++ G+G ING ECG + A+VQDR+ Y YC GV PG N++C Sbjct: 179 YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDC 319 The following BLAST results are available for this feature:
BLAST of CX298435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298435 ID=CX298435; Name=CX298435; organism=Citrus clementina; type=EST; length=558bpback to top |