CX298505

Overview
NameCX298505
Unique NameCX298505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C36_ARATH (Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAV----DIVQNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G ++V+R+ G  +LK+ ++N E L   FR+      P ++  PS+  H L   D+FLI +SDGL+E+ SN++A+      +   P    A+ L++  L  AAKK  M + +L +I +G RR +HDD++VIV+ L+  +
Sbjct:  508 KGYLKVTRAFGAGFLKQPKWN-EALLEMFRIDYVGTSPYITCSPSLHHHRLSSRDKFLILSSDGLYEYFSNEEAIFEVDSFISAFPEGDPAQHLIQEVLLRAAKKYGMDFHELLEIPQGDRRRYHDDVSVIVISLEGRI 645          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C26_ORYSJ (Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH----PRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G ++V+R+ G  YLK+A+ N   L   FR       P +S  PS+  H+L   DQFL+ +SDGL+++LSN++ V  V+N     P    A+ L++  L  AAKK  M + +L  I +G RR +HDD+TV+V+ L+  +
Sbjct:  451 KGRLKVTRAFGAGYLKQAKLNNG-LLEMFRNDYIGDTPYISCTPSLCHHKLTARDQFLVLSSDGLYQYLSNEEVVLHVENFMERFPEGDPAQSLIEELLSRAAKKAGMDFYELLDIPQGDRRKYHDDVTVMVISLEGRI 588          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C66_ARATH (Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17
Identity = 48/139 (34.53%), Postives = 83/139 (59.71%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAV----DIVQNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G ++V+R+ G  +LK+ ++N + L   FR+      P ++  PS+  H+L   D+FLI +SDGL+E+ SNQ+A+      +   P    A+ L++  L  AA K  M + +L +I +G RR +HDD++VIV+ L+  +
Sbjct:  532 KGYLKVTRAFGAGFLKQPKWN-DALLEMFRIDYIGTSPYITCSPSLCHHKLTSRDKFLILSSDGLYEYFSNQEAIFEVESFISAFPEGDPAQHLIQEVLLRAANKFGMDFHELLEIPQGDRRRYHDDVSVIVISLEGRI 669          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C35_ORYSJ (Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 49/139 (35.25%), Postives = 83/139 (59.71%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQ----NHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G ++V+R+ G  +LK+ ++N + L   FR+      P +S  PS+  H+L   D+FLI +SDGL+++ +N++AV  V+      P    A+ LV+  L  AA K  M + +L +I  G RR +HDD++VIV+ L+  +
Sbjct:  497 KGSLKVTRAFGAGFLKQPKWN-DALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLILSSDGLYQYFTNEEAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRI 634          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C32_ARATH (Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 48/139 (34.53%), Postives = 79/139 (56.83%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVD----IVQNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G ++V+R+ G  +LKK  +N E L   F++      P ++ EP    H L   D+F++ +SDGL+E+ SN++ V      ++N P    A+ L+   L  AA K  M + DL  I +G RR +HDD++V+VV L+  +
Sbjct:  702 KGQLKVTRAFGAGFLKKPNFN-EALLEMFQVEYIGTDPYITCEPCTVHHRLTSSDRFMVLSSDGLYEYYSNEEVVAHVTWFIENVPEGDPAQYLIAELLSRAATKNGMEFHDLLDIPQGDRRKYHDDVSVMVVSLEGRI 839          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C23_ARATH (Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 47/139 (33.81%), Postives = 83/139 (59.71%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQN----HPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G ++V+R+ G  +LK+ ++N   L   F++      P ++  PS+  H L   DQFLI +SDGL+++ +N++AV  V+      P    A+ LV+  L  AAKK  M + +L +I +G RR +HDD++++V+ L+  +
Sbjct:  512 KGSLKVTRAFGAGFLKQPKWNNA-LLEMFQIDYKGTSPYINCLPSLYHHRLGSKDQFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVQELLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVVISLEGRM 649          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C04_ARATH (Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 46/139 (33.09%), Postives = 84/139 (60.43%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQN----HPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G ++V+R+ G  +LK+ ++N   L   F++    + P ++  PS+  H L   D+FLI +SDGL+++ +N++AV  V+      P    A+ LV+  L  AAKK  M + +L +I +G RR +HDD++++V+ L+  +
Sbjct:  520 KGSLKVTRAFGAGFLKQPKWNNA-LLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVQELLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVVISLEGRM 657          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C40_ARATH (Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 48/146 (32.88%), Postives = 86/146 (58.90%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDI----VQNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDS-HLVSRASS 427
            +G ++V+R++G  YLKK + N + L    R+R     P +S EPS+  H++   D F+I ASDGL++  SN++A+ +    V ++P    A+ L++  + +AA +      +L  +  G RR +HDD+T++V+ L +    S+AS+
Sbjct:  347 KGKLKVTRALGVGYLKKEKLN-DALMGILRVRNLLSPPYVSVEPSMRVHKITESDHFVIVASDGLFDFFSNEEAIGLVHSFVSSNPSGDPAKFLLERLVAKAAARAGFTLEELTNVPAGRRRRYHDDVTIMVITLGTDQRTSKAST 491          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C29_ARATH (Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 47/141 (33.33%), Postives = 82/141 (58.16%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDI-VQNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRAS 424
            +G ++V+R+ G  +LK+ + N + L   FR       P +S  PS+  + L   DQF++ +SDGL+++LSN + V + ++  P    A+ +++  L  AAKK  M + +L  I +G RR +HDD TV+V+ L    + ++S
Sbjct:  640 KGRLKVTRAFGAGFLKQPKLN-DALLEMFRNEYIGTDPYISCTPSLRHYRLTENDQFMVLSSDGLYQYLSNVEVVSLAMEKFPDGDPAQHVIQELLVRAAKKAGMDFHELLDIPQGDRRKYHDDCTVLVIALGGSRIWKSS 779          
BLAST of CX298505 vs. ExPASy Swiss-Prot
Match: P2C31_ORYSJ (Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 45/139 (32.37%), Postives = 79/139 (56.83%), Query Frame = 2
Query:    5 EGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV----QNHPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHL 409
            +G + V+R+ G  YLK+ ++N   L A F++     +P +S  PS+  H +   D+FL+ +SDGL+++ +N++ VD V       P    A+ LV   +  AA+K  M    L +I  G RR++HDD+++IV+  +  +
Sbjct:  489 KGKLSVTRAFGAGYLKQPKWNDRLLEA-FKVDYIGAEPYISCTPSLRHHRISSNDRFLVLSSDGLYQYFTNKEVVDQVAMFTAEQPDGDPAKHLVGELVLRAARKAGMDCRRLLEIPHGDRRNYHDDVSIIVMSFEGRI 626          
The following BLAST results are available for this feature:
BLAST of CX298505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
P2C36_ARATH1.909e-1835.25Probable protein phosphatase 2C 36 OS=Arabidopsis ... [more]
P2C26_ORYSJ5.553e-1838.13Probable protein phosphatase 2C 26 OS=Oryza sativa... [more]
P2C66_ARATH1.237e-1734.53Probable protein phosphatase 2C 66 OS=Arabidopsis ... [more]
P2C35_ORYSJ6.140e-1735.25Protein phosphatase 2C 35 OS=Oryza sativa subsp. j... [more]
P2C32_ARATH6.140e-1734.53Protein phosphatase 2C 32 OS=Arabidopsis thaliana ... [more]
P2C23_ARATH1.786e-1633.81Probable protein phosphatase 2C 23 OS=Arabidopsis ... [more]
P2C04_ARATH3.047e-1633.09Probable protein phosphatase 2C 4 OS=Arabidopsis t... [more]
P2C40_ARATH3.980e-1632.88Probable protein phosphatase 2C 40 OS=Arabidopsis ... [more]
P2C29_ARATH1.975e-1533.33Protein phosphatase 2C 29 OS=Arabidopsis thaliana ... [more]
P2C31_ORYSJ2.852e-1432.37Probable protein phosphatase 2C 31 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC06012H09SK RindPdig24 Citrus clementina cDNA clone C06012H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298505 ID=CX298505; Name=CX298505; organism=Citrus clementina; type=EST; length=707bp
GAGGGAAGGCTTGATACAGGTTTCTAGATCTATTGGCGATGTGTATCTGA
AAAAAGCCGAGTATAACAGGGAGCCTTTGTATGCGAAATTTCGCCTTCGT
GAACCTTTTAGAAAACCAATTCTGAGTTCTGAACCATCAATTTCGGCGCA
TGAACTTCAACCTTTTGATCAGTTTCTTATATTTGCTTCTGATGGACTGT
GGGAGCATCTTAGCAATCAAGATGCGGTTGATATAGTCCAAAATCACCCA
CGCAGTGGAAGTGCTAGGAGGCTTGTGAAAGCTGCATTGCAGGAAGCTGC
GAAAAAGAGAGAAATGAGATACTCGGATTTGAAGAAGATTGATCGGGGCG
TTCGCCGGCACTTCCACGATGACATTACGGTCATTGTTGTATTTCTTGAT
TCACATCTTGTGAGCAGAGCCAGCTCAGTCAGAGGCCCGTCTTTGTCTGT
GAGAGGGGGTGGTGTTAACATGCCTTCAAAAACTTTAGCTCCATGCGCCA
CGCCCGTTGAACTTAGCACCACTTAAAAGGGGCTGGTTCTTCATGCAATT
GTAGTTGGTGCTGAAAACATTTTGGAACTTCTACAAAATATCAACTGGTA
TATGCAGGTGATGCAGAAGGTGCAGCCTTTTATTAATTTTTTAATGTACA
AATGTACACTTTTAACTTAAAAGACTTGTATTTTATTTAATTTCTGAGTA
CTTTGAG
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