CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.154e-51
Identity = 98/169 (57.99%), Postives = 128/169 (75.74%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V+EGHPDK+CDQISDA+LDA L QDP +KVACET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H+ K  +++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E
Sbjct:   13 VSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASE 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.154e-51
Identity = 98/169 (57.99%), Postives = 128/169 (75.74%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V+EGHPDK+CDQISDA+LDA L QDP +KVACET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H+ K  +++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E
Sbjct:   13 VSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASE 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 3.358e-51
Identity = 98/166 (59.04%), Postives = 127/166 (76.51%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILDA L+QDP++KVACET  KT ++++ GEIT+KA V+Y+K+VR+T ++IG+     G D   C VL+ ++QQSP+IA GV  H+++  EEIGAGDQG MFGYATDET E MPL+ VLA +L  K+ E+R++    W RPD KTQVT EY
Sbjct:   36 VGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYDDSSKGFDFKTCNVLLALDQQSPEIAAGV--HVNRAEEEIGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEY 199          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 4.386e-51
Identity = 100/172 (58.14%), Postives = 124/172 (72.09%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV+VFGE++TKA V+ +K+VRDT ++IG+     G D DNC VLV +++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+ +L  K+  +RK+GT  WLRPD K QVTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAALRKDGTIKWLRPDAKAQVTVEY 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 5.728e-51
Identity = 98/169 (57.99%), Postives = 127/169 (75.15%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V+EGHPDK+CDQISDA+LDA L QDP +KVACET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H+ K   ++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E
Sbjct:   13 VSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSE 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.481e-51
Identity = 100/175 (57.14%), Postives = 122/175 (69.71%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQISDA+LDA   +DP+++VACET   T LVMV GEITT   V+  KI R+T +NIG+     G D + C V+  I++QS DIA GV   L  R  E      +GAGDQG MFG+AT+ET EFMP    +A +L  +LTEVRKNGT P+LRPDGKTQVTVEY N+
Sbjct:   10 VTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYEND 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.481e-51
Identity = 100/175 (57.14%), Postives = 122/175 (69.71%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQISDA+LDA   +DP+++VACET   T LVMV GEITT   V+  KI R+T +NIG+     G D + C V+  I++QS DIA GV   L  R  E      +GAGDQG MFG+AT+ET EFMP    +A +L  +LTEVRKNGT P+LRPDGKTQVTVEY N+
Sbjct:   10 VTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLVMVMGEITTNCYVDIPKIARETIKNIGYDRAKYGFDCETCSVMTTIDEQSSDIAMGVDEALESRAGEKIDIDAVGAGDQGMMFGFATNETEEFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYEND 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.667e-50
Identity = 100/174 (57.47%), Postives = 123/174 (70.69%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDAILDA L +DP+++VACETCT T LVMV GEI+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKMCDQISDAILDAILTKDPNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.843e-50
Identity = 98/171 (57.31%), Postives = 124/171 (72.51%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGV---HGHLSKRPEEI--GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CD +SDA+LD CL+QDP+S+VACET  KT ++M+ GEITTKA ++Y+KI RDT R IG+ S D+G DAD C V+  I +QSPDI  GV    G  +     +  GAGDQG MFGYA +ET  FMPL+  LA +L  +LT+VRK+    +LRPDGK+QVTVEY
Sbjct:   14 VTEGHPDKICDAVSDAVLDECLKQDPNSRVACETLAKTGMIMIAGEITTKAKLDYQKIARDTVRRIGYTSSDMGFDADTCAVMESIAEQSPDIDMGVSAGKGLFNSESSNVSEGAGDQGIMFGYAINETETFMPLTIHLAHRLAERLTKVRKDKVVDYLRPDGKSQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOTE (S-adenosylmethionine synthetase OS=Clostridium tetani GN=metK PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.849e-50
Identity = 99/172 (57.56%), Postives = 122/172 (70.93%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK------RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDA+LDA LE+DP+ +VACET   T +V+V GEITT   V+  KIVR+T   IG+     G D+D C VL  I +QSPDIA GV   L        + + IGAGDQG MFGYA +ET E+MP++  +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY
Sbjct:   10 VTEGHPDKICDQISDAVLDAILERDPNGRVACETSVTTGMVLVTGEITTNCYVDIPKIVRNTIEAIGYTRAKYGFDSDTCAVLTSISEQSPDIAMGVDESLESKQGGMDKEDVIGAGDQGMMFGYANNETSEYMPMAISIAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY 181          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_CAEEL1.154e-5157.99Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL1.154e-5157.99Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_DROME3.358e-5159.04S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK_LACPL4.386e-5158.14S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK5_CAEEL5.728e-5157.99Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_CLOPS7.481e-5157.14S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP17.481e-5157.14S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOBB1.667e-5057.47S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_BRAHW2.843e-5057.31S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_CLOTE4.849e-5057.56S-adenosylmethionine synthetase OS=Clostridium tet... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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