CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 104/174 (59.77%), Postives = 120/174 (68.97%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILDA LE+DP+++VACET   T LV+V GEITT   V+  KIVRDT R IG+     G DAD C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +L+EVRK    P+LRPDGKTQVTVEY
Sbjct:   13 VTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDKALEAREGQMTDEEIEAIGAGDQGLMFGFACNETKELMPLPISLAHRLARRLSEVRKEAILPYLRPDGKTQVTVEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOBM (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDRLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOBH (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOB1 (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAMGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.080e-49
Identity = 100/174 (57.47%), Postives = 122/174 (70.11%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD+ILD  L++DP+++VACET   T LV+V GEITT   V+  K+VRDT RNIG+     G D++ C VL  I++QSPDIAQGV+  L  R         E IGAGDQG MFGYA +ETPE MPL   L+ +L  +L+E RK    P+LRPDGKTQVTVEY
Sbjct:   15 VTEGHPDKICDQISDSILDEILKEDPNARVACETSVTTGLVLVAGEITTSTYVDIPKVVRDTIRNIGYTRAKYGFDSETCAVLTSIDEQSPDIAQGVNQALEAREGQMTDAEIEAIGAGDQGLMFGYANNETPELMPLPISLSHKLARRLSEARKGEILPYLRPDGKTQVTVEY 188          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.411e-49
Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L++DP+ +VACET   T +VMV GEI+TK  V+  K+VR+T R IG+     G D + C V+  I++QS DIA GV   L  +  E      +GAGDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAIGVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOBA (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.411e-49
Identity = 99/174 (56.90%), Postives = 122/174 (70.11%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDAILDA L +D +++VACETCT T LVMV GEI+T   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +       E +GAGDQG MFG+AT+ET  +MPL   +A +L  +LTEVRK+GT  +LRPDGKTQVTVEY N
Sbjct:   10 VTEGHPDKMCDQISDAILDAILAKDSNARVACETCTTTGLVMVMGEISTNCYVDIPKVVRETVREIGYDRAKYGFDCDTCSVMTTIDEQSADIAMGVDEALESKKGQKDEVEAVGAGDQGMMFGFATNETDAYMPLPIYMAHKLSRRLTEVRKDGTLDYLRPDGKTQVTVEYEN 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.407e-49
Identity = 102/174 (58.62%), Postives = 119/174 (68.39%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILDA LE+DP+++VACET   T LV+V GEITT   V+  +IVRDT R IG+     G DAD C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MPL   LA +L  +L EVRK    P+LRPDGKTQVT+EY
Sbjct:   13 VTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKFGFDADTCAVLTAIDEQSPDIAMGVDQALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPLPISLAHRLSRRLAEVRKTDVLPYLRPDGKTQVTIEY 186          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_GEOSW6.333e-5059.77S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_CLOBM6.333e-5055.75S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBL6.333e-5055.75S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBJ6.333e-5055.75S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBH6.333e-5055.75S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOB16.333e-5055.75S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_BACHD1.080e-4957.47S-adenosylmethionine synthetase OS=Bacillus halodu... [more]
METK_CLOBK1.411e-4955.75S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBA1.411e-4956.90S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_GEOTN2.407e-4958.62S-adenosylmethionine synthetase OS=Geobacillus the... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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