CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.143e-49
Identity = 97/172 (56.40%), Postives = 123/172 (71.51%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA LEQDP ++VACET   T LV+V GEI+T A V+ +K+VR+T + IG+     G D DNC V+V +++QSPDIAQGV   L  R       ++IGAGDQG MFG+A D+TPE MPL   L+ +L  K+ E+RK+G   +LRPD K QVTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDAMLEQDPQARVACETTVTTGLVLVVGEISTTAYVDIQKVVRETIKKIGYRDGQYGFDGDNCAVIVALDEQSPDIAQGVDDSLESREKDEDPLDKIGAGDQGLMFGFAVDQTPELMPLPIALSHRLMRKVAELRKSGQLAYLRPDAKAQVTVEY 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.105e-49
Identity = 98/173 (56.65%), Postives = 124/173 (71.68%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILDA L  DP S+VA E  T T LV++ GE+TT+ANVN+ ++ R   + IG+ + D G  A++C V+V +++QSPDIAQGV     +R        +EIGAGDQG MFGYA +ETPEFMPL   LA +L  KL++VRK+G  P+L PDGKTQVTV Y
Sbjct:   12 VTEGHPDKICDQISDAILDAVLAADPSSRVAAEVVTNTGLVLITGELTTQANVNFIQVARQKIKEIGYTNADNGFSANSCSVMVALDEQSPDIAQGVTSAQEQRDKLSDDQLDEIGAGDQGLMFGYACNETPEFMPLPISLAHRLSLKLSQVRKSGELPYLGPDGKTQVTVIY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.105e-49
Identity = 99/172 (57.56%), Postives = 120/172 (69.77%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QDPDS+VACET   T LV+VFGEI+TKA V+ +K+VR T + IG+     G D DNC VLV I++QSPDIAQGV   L  R       ++IGAGDQG MFGYA +ETPE MPL   L+  L  ++  +RK     +LRPD K +VTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDALLAQDPDSRVACETSVTTGLVLVFGEISTKAYVDIQKVVRQTIKEIGYTDGQYGFDGDNCAVLVAIDEQSPDIAQGVDDSLETREGDADPLDQIGAGDQGLMFGYAVNETPELMPLPIELSHALMRRIAMLRKQAVLDYLRPDAKAEVTVEY 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.105e-49
Identity = 101/174 (58.05%), Postives = 119/174 (68.39%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILDA LE+DP+++VACET   T LV+V GEITT   V+  +IVRDT R IG+     G DAD C VL  I++QSPDIA GV   L  R         E IGAGDQG MFG+A +ET E MP+   LA +L  +L EVRK    P+LRPDGKTQVT+EY
Sbjct:   13 VTEGHPDKICDQISDAILDAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKYGFDADTCAVLTSIDEQSPDIAMGVDRALEAREGQMTDEEIEAIGAGDQGLMFGFACNETEELMPMPISLAHRLARRLAEVRKTDVLPYLRPDGKTQVTIEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.361e-49
Identity = 99/172 (57.56%), Postives = 120/172 (69.77%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQG------VHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISDA+LDA L  DP ++VACET   T LV+V GEITT A V+   +VRD  R+IG+     G D   C V+  I+ QSPDIAQG      V G ++++  EIGAGDQG MFG+A DETPE MPL   LA +L  +L +VRKNGT P+LRPDGKTQVT+EY
Sbjct:   15 VTEGHPDKMADQISDAVLDAILALDPRARVACETLLTTGLVVVTGEITTHAYVDIPNLVRDVVRDIGYTRAKYGFDGSTCGVMTAIDPQSPDIAQGVDVAIEVRGEVNEKELEIGAGDQGMMFGFACDETPELMPLPISLAHRLARRLAQVRKNGTLPYLRPDGKTQVTIEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.361e-49
Identity = 100/174 (57.47%), Postives = 119/174 (68.39%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDA+LDA   QDP ++VACET   T LV+V GEITT   V+  KIVR T R IG+     G D D C VL  I++QSPDIA GV+  L  +         E IGAGDQG MFG+A DETPE MP+   LA +L  +L++VRKNGT  +LRPDGK+QVTVEY
Sbjct:   11 VTEGHPDKICDQISDAVLDAIFSQDPMARVACETAVTTGLVLVTGEITTNCYVDIPKIVRSTIREIGYDRAKYGFDCDTCAVLTSIDEQSPDIAMGVNKALEAKTGEMSDEEIEAIGAGDQGMMFGFACDETPELMPMPISLAHKLAMRLSQVRKNGTLNYLRPDGKSQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.361e-49
Identity = 100/177 (56.50%), Postives = 119/177 (67.23%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR--------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQISDA+LDA LE+DP ++VACE    T LV+V GEITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++
Sbjct:   10 VTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTDDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDD 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.361e-49
Identity = 100/177 (56.50%), Postives = 119/177 (67.23%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR--------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQISDA+LDA LE+DP ++VACE    T LV+V GEITTK  V+  KI RDT R IG+     G DAD C V+  I++QSPDIA GV   L  +         E IGAGDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++
Sbjct:   10 VTEGHPDKICDQISDAVLDAILEKDPYARVACEVAVTTGLVLVMGEITTKCYVDIPKIARDTIREIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVDKALEAKLGEMTEDEIEAIGAGDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDD 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.002e-49
Identity = 99/174 (56.90%), Postives = 119/174 (68.39%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISDA+LDA L QDP ++VACET   T LV+V GEITT   V+  K+VR+T R IG+     G D D C V+  I++QSPDIA GV+  L  +         E IGAGDQG MFGYAT+ETPE MP+   LA +L  +L EVRK+   P+LRPDGKTQVTVEY
Sbjct:   11 VTEGHPDKIADQISDAVLDAILAQDPQARVACETAVTTGLVLVIGEITTSCYVDIPKVVRETIREIGYTRAKYGFDGDTCAVITSIDEQSPDIALGVNRALEAKTGEMTDDEIEAIGAGDQGMMFGYATNETPELMPMPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.194e-48
Identity = 99/172 (57.56%), Postives = 119/172 (69.19%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILDA L+ DP+ +VACET   T +VMV GEI+T   V+  K+VR+   +IG+     G DA+ C VL  I++QS DIA GV   L  R       E IGAGDQG MFG+AT+ET E+MPL   +A +L  KL EVRKNGT  +LRPDGKTQVTVEY
Sbjct:   10 VTEGHPDKMCDQISDAILDAILKNDPNGRVACETAVTTGMVMVMGEISTNCYVDIPKVVREVISDIGYTRAKYGFDAETCSVLTSIDEQSQDIAMGVDEALESRQGQKDDVEAIGAGDQGIMFGFATNETKEYMPLPINMAHKLSRKLAEVRKNGTLAYLRPDGKTQVTVEY 181          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACSS3.143e-4956.40S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_SYNP24.105e-4956.65S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_LACBA4.105e-4957.56S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_GEOKA4.105e-4958.05S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_SYMTH5.361e-4957.56S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_CLOTH5.361e-4957.47S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_CALS85.361e-4956.50S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_ANATD5.361e-4956.50S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_CARHZ7.002e-4956.90S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK_CLONN1.194e-4857.56S-adenosylmethionine synthetase OS=Clostridium nov... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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