CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_THETN (S-adenosylmethionine synthetase OS=Thermoanaerobacter tengcongensis GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.560e-48
Identity = 99/174 (56.90%), Postives = 120/174 (68.97%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILD  L++DP ++VACET   T LV+V GEITT+  V+  +I RD  R+IG+     G DAD C V+  I++QSPDIA GV+  L  R         E IGAGDQG M G+A DET E MP+  +LA +L  +L EVRKNGT  +LRPDGKTQVTVEY
Sbjct:   10 VTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTECYVDIPRIARDVIRDIGYTRAKYGFDADTCAVITSIDEQSPDIAMGVNKALEARRGELTDAEIEAIGAGDQGLMIGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEY 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOPH (S-adenosylmethionine synthetase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.560e-48
Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE--------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQISDA+LDA LEQDP S+VACET   T LV+V GEITT   V+ +KIVRDT + IG+     G DAD C V+V +++QS DIA GV   L  +  E        IGAGDQG MFGYA++ET E MP    LA +L  +L++VRK+GT  +LRPDGK+QVTVEY  E
Sbjct:   12 VTEGHPDKICDQISDAVLDALLEQDPMSRVACETAITTGLVLVMGEITTSGYVDIQKIVRDTVKEIGYDRAKYGFDADTCGVIVALDEQSKDIALGVDKALEAKQNEMTDEAIEAIGAGDQGMMFGYASNETEELMPYPISLAHKLTKQLSKVRKDGTLSYLRPDGKSQVTVEYNEE 188          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.560e-48
Identity = 98/174 (56.32%), Postives = 122/174 (70.11%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVH-------GHLS-KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDA+LDA  E+DP ++VACET   T +VMV GEITT   V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV        G +S ++ + IGAGDQG MFG+A DETPE MP+  +LA +L  KL+EVRKNG   +LRPDGK+QVTVEY
Sbjct:   11 VTEGHPDKICDQISDAVLDAIYEKDPQARVACETAVTTGMVMVMGEITTNCYVDIPKVVRNTIREIGYDRAKYGFDCDTCAVMTSIDEQSSDIAMGVDKALEAKVGEMSEEQVQAIGAGDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOAB (S-adenosylmethionine synthetase OS=Clostridium acetobutylicum GN=metK PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.560e-48
Identity = 98/175 (56.00%), Postives = 120/175 (68.57%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQISDAILDA LE+DP+ +VACET   T +V V GEI+T   V+  KIVR T R IG+     G D D C V+  I++QS DIA GV   L  +  E      +GAGDQG MFGYAT+ET EFMP+   LA +L  +L EVRK+GT  +LRPDGKTQVT+EY ++
Sbjct:   10 VTEGHPDKICDQISDAILDAILEKDPNGRVACETTVTTGIVNVMGEISTNCYVDIPKIVRKTVREIGYTRAKYGFDCDTCAVVTSIDEQSADIAMGVDEALESKKGEMDKIDAVGAGDQGMMFGYATNETKEFMPMPIALAHRLSRRLAEVRKDGTLDYLRPDGKTQVTIEYEDD 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.037e-48
Identity = 99/168 (58.93%), Postives = 120/168 (71.43%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GEITTKA V+ E+I R T R IG+ S D+G DA++C V+  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  +VRKNGT PWLRPD K+Q+T +Y N
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTLPWLRPDAKSQITFQYDN 175          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLOD6 (S-adenosylmethionine synthetase OS=Clostridium difficile (strain 630) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.037e-48
Identity = 99/174 (56.90%), Postives = 120/174 (68.97%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD+ILDA LE+DP S+VACET   T LV+V GEI+T A V+  K+VR+T R IG+     G D D C V+  I++QS DIA GV   L  +         E++GAGDQG MFG+A +ETPE MPL   LA +L  +LTEVRK G   +LRPDGKTQVTVEY
Sbjct:   11 VTEGHPDKICDQISDSILDALLEKDPQSRVACETTVTTGLVLVAGEISTSAYVDIPKLVRETVREIGYTRAKYGFDCDTCAVITSIDEQSGDIAMGVDEGLESKTGEEIEEEIEKVGAGDQGIMFGFACNETPELMPLPISLAHKLSRRLTEVRKTGLVDYLRPDGKTQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PHOPR (S-adenosylmethionine synthetase OS=Photobacterium profundum GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.475e-48
Identity = 97/166 (58.43%), Postives = 120/166 (72.29%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +VMV GEITT A V+ E+I R+T R IG+ + ++G DA++C VL  I +QSPDI QGV     + P E+GAGDQG MFGYA+DET   MP     A +L  +  +VRKNGT PWLRPD K+QVT  Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRETIREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPRELGAGDQGIMFGYASDETDVLMPAPVTYAHRLVQRQAKVRKNGTLPWLRPDAKSQVTFAY 173          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.475e-48
Identity = 101/174 (58.05%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY
Sbjct:   13 VSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGNEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LISMH (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.475e-48
Identity = 101/174 (58.05%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY
Sbjct:   13 VSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LISMF (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.475e-48
Identity = 101/174 (58.05%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY
Sbjct:   13 VSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEY 186          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THETN1.560e-4856.90S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_CLOPH1.560e-4857.06S-adenosylmethionine synthetase OS=Clostridium phy... [more]
METK_CLOCE1.560e-4856.32S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_CLOAB1.560e-4856.00S-adenosylmethionine synthetase OS=Clostridium ace... [more]
METK_PROMH2.037e-4858.93S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_CLOD62.037e-4856.90S-adenosylmethionine synthetase OS=Clostridium dif... [more]
METK_PHOPR3.475e-4858.43S-adenosylmethionine synthetase OS=Photobacterium ... [more]
METK_LISMO3.475e-4858.05S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMH3.475e-4858.05S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMF3.475e-4858.05S-adenosylmethionine synthetase OS=Listeria monocy... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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