CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LISMC (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.475e-48
Identity = 101/174 (58.05%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY
Sbjct:   13 VSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LISIN (S-adenosylmethionine synthetase OS=Listeria innocua GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.475e-48
Identity = 101/174 (58.05%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY
Sbjct:   13 VSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGSEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_METFK (S-adenosylmethionine synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.539e-48
Identity = 94/166 (56.63%), Postives = 126/166 (75.90%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISD+ILDA LEQDP ++VA ET T T LV++ GEITT ANV+Y KI RDT + IG+ + D G+D  +C VLV  ++QSPDIAQGV+ + +  P + GAGDQG MFGYA DETP+ +PL   L+ ++  + +++RK+G  PWLRPD K+QVT++Y
Sbjct:   11 VSEGHPDKVADQISDSILDAILEQDPTARVAAETLTNTGLVVLAGEITTTANVDYIKIARDTIKRIGYDNADYGIDYKSCAVLVAYDKQSPDIAQGVN-NANDDPLDQGAGDQGLMFGYACDETPQLLPLPIWLSHRMVERQSQLRKDGRLPWLRPDAKSQVTIQY 175          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.539e-48
Identity = 99/174 (56.90%), Postives = 120/174 (68.97%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILD  L++DP+++VACET   T LV+V GEITT   V+   +VR T + IG+     G DA+ C VL  I++QS DIAQGV   L  R         E IGAGDQG MFG+AT+ET E MPL   L+ +L  +LTEVRKNGT  +LRPDGKTQVT+EY
Sbjct:   15 VTEGHPDKICDQISDAILDEILKKDPNARVACETSVTTGLVLVAGEITTNTYVDIPSVVRQTIKGIGYTRAKYGFDAETCAVLTSIDEQSADIAQGVDKALEAREGQMTDAEIEAIGAGDQGLMFGFATNETEELMPLPISLSHKLSRRLTEVRKNGTLGYLRPDGKTQVTIEY 188          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ALKOO (S-adenosylmethionine synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.539e-48
Identity = 101/173 (58.38%), Postives = 119/173 (68.79%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDAILDA LE+DP ++VACET   T LV+V GEITTK  V+  KIVR T   IG+     G D+D C VL  I +QS DIA GV   L  +        E IGAGDQG MFG+A +ETPE MPL   LA +L  +L++VRK+GT  +LRPDGKTQVTVEY
Sbjct:   11 VTEGHPDKMCDQISDAILDAILEKDPAARVACETSVSTGLVLVAGEITTKCYVDIPKIVRKTIEEIGYTRAKYGFDSDTCAVLTAINEQSADIALGVDEALESKKGEHRDELEAIGAGDQGIMFGFACNETPELMPLPISLAHKLAKRLSDVRKDGTIGYLRPDGKTQVTVEY 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.928e-48
Identity = 100/177 (56.50%), Postives = 121/177 (68.36%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGV-------HGHLS-KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQISDAILD  L++DP ++VACET   T LV+V GEITT+  V+  K+VR     IG+     G DAD C V+  I++QSPDIA GV        G LS    E IGAGDQG MFG+A DET E MP+  +LA +L  +L EVRKNGT  +LRPDGKTQVTVEY ++
Sbjct:   10 VTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDD 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.928e-48
Identity = 101/174 (58.05%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V++GHPDK+ DQISDAILDA + +DPD++VACET   T LV+V GEITT   V+  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV   L  R         E IGAGDQG MFG+ATDET E MPL   LA  L  KLTE+RK     +LRPD KTQVTVEY
Sbjct:   13 VSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGSEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTKKLDYLRPDAKTQVTVEY 186          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_THEAB (S-adenosylmethionine synthetase OS=Thermosipho africanus (strain TCF52B) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.742e-48
Identity = 99/175 (56.57%), Postives = 121/175 (69.14%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP---------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISDAILDA LEQDP S+VA ET   T + +V GE+TT+A V+ + IVR T  +IG+     G D + C VL  I  QSPDIA GV   L  +          E++GAGDQG MFGYAT+ET E+MPL  +L+ +L  KL+EVRKNGT P+LRPDGKTQVT+EY
Sbjct:   10 VTEGHPDKVADQISDAILDAMLEQDPKSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTILDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVDKALEAKEGELIAEDELEQVGAGDQGMMFGYATNETKEYMPLPIMLSHKLAMKLSEVRKNGTLPFLRPDGKTQVTIEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_SYNS9 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9902) GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.742e-48
Identity = 97/173 (56.07%), Postives = 123/173 (71.10%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDV-GLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V EGHPDK+CDQ+SDA+LDA L QDP S+VACET   T L M+ GE+T+KA V++  +VRD  + IG++     G DA++C VLV ++QQSPDIAQGV+    H     + +GAGDQG MFGYA +ETPE MPL   LA +L  +L EVR NGT  +L PDGKTQV+V Y N+
Sbjct:   11 VTEGHPDKICDQVSDAVLDALLAQDPASRVACETVVNTGLCMITGEVTSKAKVDFIHLVRDVIKEIGYSGARAGGFDANSCAVLVALDQQSPDIAQGVNEADDHAGDPLDLVGAGDQGIMFGYACNETPELMPLPISLAHRLARQLAEVRHNGTLDYLLPDGKTQVSVVYEND 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_GLOVI (S-adenosylmethionine synthetase OS=Gloeobacter violaceus GN=metK PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 7.742e-48
Identity = 98/172 (56.98%), Postives = 119/172 (69.19%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD ILDA L QDP S+VA E    T +V+V GEITT ANVN+ K+VRD  R IG+   D G  AD+C V + +++QSP+IAQGV   L  R  E      IGAGDQG MFG+A  ETPE MPL   +A +L  +L +VRK+GT  +L+PDGK QVTVEY
Sbjct:   11 VTEGHPDKICDQISDTILDALLTQDPRSRVAAEVVVNTGMVVVTGEITTTANVNFTKLVRDKIREIGYTEADNGFSADSCAVFLALDEQSPEIAQGVSCALEVRTSEEDALDRIGAGDQGLMFGFACTETPELMPLPISVAHRLTRRLAQVRKDGTLAYLKPDGKAQVTVEY 182          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LISMC3.475e-4858.05S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISIN3.475e-4858.05S-adenosylmethionine synthetase OS=Listeria innocu... [more]
METK_METFK4.539e-4856.63S-adenosylmethionine synthetase OS=Methylobacillus... [more]
METK_BACSK4.539e-4856.90S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_ALKOO4.539e-4858.38S-adenosylmethionine synthetase OS=Alkaliphilus or... [more]
METK_THEP35.928e-4856.50S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_LISW65.928e-4858.05S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_THEAB7.742e-4856.57S-adenosylmethionine synthetase OS=Thermosipho afr... [more]
METK_SYNS97.742e-4856.07S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_GLOVI7.742e-4856.98S-adenosylmethionine synthetase OS=Gloeobacter vio... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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