CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECOHS (S-adenosylmethionine synthetase OS=Escherichia coli O9:H4 (strain HS) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECODH (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / DH10B) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECOBW (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / BW2952) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECO8A (S-adenosylmethionine synthetase OS=Escherichia coli O8 (strain IAI1) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECO7I (S-adenosylmethionine synthetase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECO5E (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECO57 (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 GN=metK PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECO55 (S-adenosylmethionine synthetase OS=Escherichia coli (strain 55989 / EAEC) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECO27 (S-adenosylmethionine synthetase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ECO24 (S-adenosylmethionine synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metK PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47
Identity = 98/166 (59.04%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA LEQDP ++VACET  KT +V+V GEITT A V+ E+I R+T R IG+   D+G DA++C VL  I +QSPDI QGV       P E GAGDQG MFGYAT+ET   MP     A +L  +  EVRKNGT PWLRPD K+QVT +Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY 173
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECOHS1.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECODH1.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOBW1.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO8A1.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO7I1.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO5E1.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO571.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO551.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO271.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO241.725e-4759.04S-adenosylmethionine synthetase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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