CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 3.670e-90
Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKA+V+YEKIVR TCR+IGF S DVGLDADNCKVLVYIEQQSPDIAQGVHGHLS+RPEEIGAGDQGHMFGYA+DETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNE
Sbjct:   15 VNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNE 183
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 3.670e-90
Identity = 154/169 (91.12%), Postives = 163/169 (96.45%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDK+CDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTK NV+YEKIVR TCR+IGF S DVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+
Sbjct:   15 VNEGHPDKMCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKGNVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYND 183
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.793e-90
Identity = 156/169 (92.31%), Postives = 162/169 (95.86%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQSPDIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYNE
Sbjct:   12 VNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNE 180
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.793e-90
Identity = 155/169 (91.72%), Postives = 163/169 (96.45%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDAILDACLEQDPDSKVACETC+KTN+VM+FGEITTKANV+YEKIVRDTCR IGF SDDVGLDADNCKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY N+
Sbjct:   14 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCSKTNMVMIFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRND 182
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.793e-90
Identity = 156/169 (92.31%), Postives = 162/169 (95.86%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQSPDIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYNE
Sbjct:   12 VNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNE 180
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 4.793e-90
Identity = 154/169 (91.12%), Postives = 163/169 (96.45%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIVRDTCR IGF SDDVGLDADNCKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVTVEYYN+
Sbjct:   11 VNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYND 179
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 8.176e-90
Identity = 156/169 (92.31%), Postives = 162/169 (95.86%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACLEQD DSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGF SDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDET E MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNE
Sbjct:   11 VNEGHPDKLCDQISDAVLDACLEQDQDSKVACETCTKTNMVMVFGEITTKAAVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETSELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNE 179
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 8.176e-90
Identity = 155/169 (91.72%), Postives = 163/169 (96.45%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKANV+YEKIVR TCR+IGF S DVGLDADNCKVLV IEQQSPDIAQGVHGHL++RPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNE
Sbjct:   15 VNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNE 183
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 8.176e-90
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQ+SDAILDACLEQDPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVR TCR+IGF SDDVGLDAD C VLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY NE
Sbjct:   11 VNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNE 179
[Close]
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.068e-89
Identity = 154/169 (91.12%), Postives = 163/169 (96.45%), Query Frame = 2 
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+++YEKIVRDTCR IGF SDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY+NE
Sbjct:   11 VNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADIDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNE 179
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ATRNU3.670e-9091.72S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_BETVU3.670e-9091.12S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK_POPDE4.793e-9092.31S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK_DENCR4.793e-9091.72S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK3_POPTR4.793e-9092.31S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK2_ELAUM4.793e-9091.12S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK_CAMSI8.176e-9092.31S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK3_ATRNU8.176e-9091.72S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK2_POPTR8.176e-9091.72S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK5_VITVI1.068e-8991.12S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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