CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.068e-89
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA VNYEKIVRDTCR IGF S DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVTVEY NE
Sbjct:   11 VNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYRNE 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 1.395e-89
Identity = 153/169 (90.53%), Postives = 163/169 (96.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDP+SKVACETC+KTN+VMVFGEITTKA+V+YEKIVRDTCR IGF SDDVGLDADNCK LV IEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+
Sbjct:   11 VNEGHPDKLCDQISDAVLDACLAQDPESKVACETCSKTNMVMVFGEITTKADVDYEKIVRDTCRGIGFTSDDVGLDADNCKALVNIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATRLGARLTEVRKNGTCPWLRPDGKTQVTVEYYND 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 1.821e-89
Identity = 152/169 (89.94%), Postives = 162/169 (95.86%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVRDTCR IGF SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPEE+GAGDQGHMFGYATDETPE MPL+HVLAT+LG++LTEVRKNGTC WLRPDGKTQVT+EYYNE
Sbjct:   12 VNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGSRLTEVRKNGTCAWLRPDGKTQVTIEYYNE 180          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.107e-89
Identity = 152/169 (89.94%), Postives = 163/169 (96.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTK N++YEKIVRDTCR+IGF S+DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY N+
Sbjct:   12 VNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRDIGFTSEDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRND 180          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.107e-89
Identity = 152/168 (90.48%), Postives = 163/168 (97.02%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            VNEGHPDKLCDQ+SDA+LDACL QDPDSKVACETCT+TN+VMVFGEITTKANV+YE+IVRDTCR+IGF SDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYN
Sbjct:   11 VNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMVMVFGEITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYN 178          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 4.058e-89
Identity = 153/169 (90.53%), Postives = 162/169 (95.86%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+
Sbjct:   11 VNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYND 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 4.058e-89
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQS DIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEYYNE
Sbjct:   12 VNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSSDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNE 180          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 4.058e-89
Identity = 153/169 (90.53%), Postives = 162/169 (95.86%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+
Sbjct:   11 VNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYND 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 4.058e-89
Identity = 153/169 (90.53%), Postives = 162/169 (95.86%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+
Sbjct:   11 VNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYND 179          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 5.300e-89
Identity = 152/169 (89.94%), Postives = 163/169 (96.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            VNEGHPDKLCDQISDA+LDACL +DPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVRDTCR IGF S+DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLAT+LGA+LTEVRKN TCPWLRPDGKTQVTVEY+N+
Sbjct:   14 VNEGHPDKLCDQISDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHND 182          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_VITVI1.068e-8991.72S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK_GOSHI1.395e-8990.53S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK_MEDTR1.821e-8989.94S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK_MUSAC3.107e-8989.94S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK_LITCN3.107e-8990.48S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK_BRARP4.058e-8990.53S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_POPTR4.058e-8991.72S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK5_BRAJU4.058e-8990.53S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK1_BRAJU4.058e-8990.53S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK_WHEAT5.300e-8989.94S-adenosylmethionine synthetase OS=Triticum aestiv... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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