CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.193e-44
Identity = 90/166 (54.22%), Postives = 118/166 (71.08%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA  +QDP ++VA ET   T LV++ GEITT ANV+Y ++ R T + IG+ + D G+D  +C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DETPE MP +   A ++  + +E+RK+G  PWLRPD K+QVT+ Y
Sbjct:   12 VSEGHPDKVADQISDAILDAIFQQDPKARVAAETLCNTGLVVLAGEITTFANVDYIEVARQTIKRIGYDNADYGIDYKSCAVLVAYDKQSPDIAQGVDEGAGIDLDQ-GAGDQGLMFGYACDETPELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRY 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.193e-44
Identity = 91/166 (54.82%), Postives = 116/166 (69.88%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QD  S+VA ET   T LV++ GEITT ANV+Y ++ R+T + IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DETPE MPL   L+ +L  +   +R++G  PWLRPD K+QVT+ Y
Sbjct:   12 VSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANVDYIQVARETIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQ-GAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTIRY 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STRA5 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype V GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVH------GHLSKRP-EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA LEQDPD+ VA ET   T  V VFGEI+T A V+  ++VR+T   IG+   + G  A++  V   + +QSPDIAQGV+      G L + P + IGAGDQG MFG+A DETPE MPL   LA QL  KLT++RK+G   +LRPD K+QVTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STRA3 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype III GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVH------GHLSKRP-EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA LEQDPD+ VA ET   T  V VFGEI+T A V+  ++VR+T   IG+   + G  A++  V   + +QSPDIAQGV+      G L + P + IGAGDQG MFG+A DETPE MPL   LA QL  KLT++RK+G   +LRPD K+QVTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STRA1 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype Ia GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 97/173 (56.07%), Postives = 120/173 (69.36%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVH------GHLSKRP-EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA LEQDPD+ VA ET   T  V VFGEI+T A V+  ++VR+T   IG+   + G  A++  V   + +QSPDIAQGV+      G L + P + IGAGDQG MFG+A DETPE MPL   LA QL  KLT++RK+G   +LRPD K+QVTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 92/168 (54.76%), Postives = 115/168 (68.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDAILDA L QD  ++VA ET   T LV++ GEITT ANV+Y  + R+T + IG+ + D G+D   C VLV  ++QSPDIAQGV    S      GAGDQG MFGYA DETPE MP     A +L  + +++R++G  PWLRPD K+QVTV Y N
Sbjct:   12 VSEGHPDKVADQISDAILDAILAQDKYARVAAETLCNTGLVVLAGEITTSANVDYIHVARETIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV-DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVN 178          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PSYCK (S-adenosylmethionine synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QD  ++VACET  KT  V++ GEITT AN++ E+IVRDT   IG+   D+G D + C V+  + +QSP+IAQGV       PEE GAGDQG MFGYA++ET   MP     A +L  + +E+R+ G  PWLRPD K QVT++Y
Sbjct:   12 VSEGHPDKMADQISDAILDAILRQDLHARVACETLVKTGAVVLAGEITTTANIDVERIVRDTVNGIGYHHSDLGFDGETCAVINMLGKQSPEIAQGVD---RADPEEQGAGDQGLMFGYASNETEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQVTLKY 174          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PROMS (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain AS9601) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 91/172 (52.91%), Postives = 120/172 (69.77%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDV-GLDADNCKVLVYIEQQSPDIAQGVH---GHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L +DP+S+VACET   T L ++ GEIT+KA V+Y K+VR+  + IG+      G DA++C VLV +++QSPDI+QGV+          +  GAGDQG MFGYA DETPE MPL   LA +L  +L++VR      +L PDGKTQV+++Y N
Sbjct:   11 VTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNEADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLSKVRHENMLNYLLPDGKTQVSIDYKN 182          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V+EGHPDK+ DQ+SDAILDA L+QD  S+VACET   T + ++ GEITT A V Y K+VR+  R+IG+    +G D + C VL  I++QSPDI+QGV        E+ GAGDQG MFGYA DET   MP+    A QL  +++EVRK+G   +LRPD K+QV+V+Y N+
Sbjct:   13 VSEGHPDKVADQVSDAILDAILDQDRQSRVACETMVTTGMAVIAGEITTNARVEYPKVVREVIRDIGYNDSAMGFDWETCAVLTSIDRQSPDISQGVTEGAGLFKEQ-GAGDQGLMFGYACDETSVLMPMPITYAHQLTQRMSEVRKSGLLTFLRPDSKSQVSVQYIND 180          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_OCEIH (S-adenosylmethionine synthetase OS=Oceanobacillus iheyensis GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 94/174 (54.02%), Postives = 115/174 (66.09%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP--------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISDAILD  L++DP+++VACET   T LV+V GEI+T   V+   +VR+T + IG+     G D + C VL  I++QS DIA GV+  L  R         + IGAGDQG MFGYA DET E MPL   LA QL  +L +VRK G   +LRPDGKTQVTVEY
Sbjct:   13 VTEGHPDKMSDQISDAILDEILKKDPNARVACETTVTTGLVLVSGEISTSTYVDIPALVRETVKEIGYTRAKYGFDFETCAVLTAIDEQSADIAGGVNQALEARQGKMSEEEIDAIGAGDQGLMFGYACDETEELMPLPISLAHQLSKRLADVRKEGIVDYLRPDGKTQVTVEY 186          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_JANMA5.193e-4454.22S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_BURP85.193e-4454.82S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_STRA56.782e-4456.07S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STRA36.782e-4456.07S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STRA16.782e-4456.07S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_RALSO6.782e-4454.76S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_PSYCK6.782e-4454.22S-adenosylmethionine synthetase OS=Psychrobacter c... [more]
METK_PROMS6.782e-4452.91S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PELCD6.782e-4452.66S-adenosylmethionine synthetase OS=Pelobacter carb... [more]
METK_OCEIH6.782e-4454.02S-adenosylmethionine synthetase OS=Oceanobacillus ... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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