CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_NITOC (S-adenosylmethionine synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V+EGHPDK+ DQISD ILDA L QD  ++VACET  KT +V+V GEITT+A+++YE+I+R+T   IG+   ++G D   C V+  I +QS DIAQGV   L    E+ GAGDQG MFGYA+DET   MP     A +L  +  E+R+NG  PWLRPD K+QVT+ Y ++
Sbjct:   12 VSEGHPDKVADQISDVILDAILAQDRRARVACETLVKTGMVLVAGEITTQAHIDYEQIIRETITEIGYNHSEIGFDGATCAVVNAIGKQSSDIAQGVDRELE---EDQGAGDQGMMFGYASDETDVLMPAPITYAHRLVQRQAEIRRNGELPWLRPDAKSQVTLLYEDD 177          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_KOSOT (S-adenosylmethionine synthetase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 95/172 (55.23%), Postives = 113/172 (65.70%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQ+SDAILDA LEQDP+S+VA ET   T + +V GE+TTKA V+  +IVRDT   IG+     G D + C VL  I++QSPDIA GV+  L  + +       IGAGDQG MFGYAT+ET E MPL  VLA  L  +L  VRK       RPDGKTQVTV Y
Sbjct:   11 VTEGHPDKIADQVSDAILDAMLEQDPESRVAVETLVATGVAVVAGEVTTKAYVDIPRIVRDTILEIGYTRAKFGFDGETCAVLTSIDEQSPDIALGVNKSLEAKNDGKDKYDIIGAGDQGMMFGYATNETEEMMPLPIVLAHNLARRLATVRKERIVEGFRPDGKTQVTVLY 182          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y N
Sbjct:   12 VSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYEN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y N
Sbjct:   12 VSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYEN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y N
Sbjct:   12 VSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYEN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.782e-44
Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDAILDA L++DP ++VACET  KT  V++ GEITT AN++ E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PE+ GAGDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y N
Sbjct:   12 VSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYEN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PSYA2 (S-adenosylmethionine synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=metK PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44
Identity = 89/166 (53.61%), Postives = 115/166 (69.28%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QD  ++VACET  KT  V++ GEITT AN++ E+IVRDT   IG+   D+G D + C V+  + +QSP+IAQGV       PEE GAGDQG MFGYA++ET   MP     A +L  + +E+R+ G  PWLRPD K Q+T++Y
Sbjct:   12 VSEGHPDKMADQISDAILDAILRQDLHARVACETLVKTGAVILAGEITTTANIDVERIVRDTVNGIGYHHSDLGFDGETCAVINMLGKQSPEIAQGVD---RADPEEQGAGDQGLMFGYASNETEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQITLKY 174          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_MYCSM (S-adenosylmethionine synthetase OS=Mycobacterium smegmatis GN=metK PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44
Identity = 97/173 (56.07%), Postives = 112/173 (64.74%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE-------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CD ISD++LDA LEQDP S+VA ET   T  V V GE+TT A  +  KIVRD   +IG+ S   G D  +C V V I  QSPDIAQGV      R E         GAGDQG MFGYA  +TPE MPL   LA +L  +LTEVRKNG   +LRPDGKTQVT++Y
Sbjct:   12 VTEGHPDKICDAISDSVLDALLEQDPKSRVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDRILDIGYDSSTKGFDGASCGVNVAIGAQSPDIAQGVDTAHETRVEGKADPLDLQGAGDQGLMFGYAIGDTPELMPLPIALAHRLARRLTEVRKNGVLDYLRPDGKTQVTIQY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_MYCS2 (S-adenosylmethionine synthetase OS=Mycobacterium smegmatis GN=metK PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44
Identity = 97/173 (56.07%), Postives = 112/173 (64.74%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE-------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CD ISD++LDA LEQDP S+VA ET   T  V V GE+TT A  +  KIVRD   +IG+ S   G D  +C V V I  QSPDIAQGV      R E         GAGDQG MFGYA  +TPE MPL   LA +L  +LTEVRKNG   +LRPDGKTQVT++Y
Sbjct:   12 VTEGHPDKICDAISDSVLDALLEQDPKSRVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDRILDIGYDSSTKGFDGASCGVNVAIGAQSPDIAQGVDTAHETRVEGKADPLDLQGAGDQGLMFGYAIGDTPELMPLPIALAHRLARRLTEVRKNGVLDYLRPDGKTQVTIQY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LEIXX (S-adenosylmethionine synthetase OS=Leifsonia xyli subsp. xyli GN=metK PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44
Identity = 97/173 (56.07%), Postives = 111/173 (64.16%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI-------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD+ILDA L  D  S+VA ET   T LV V GE+TTK  V    +VRDT   IG+ S DV  D   C V V I  QSPDIAQGV   L  R E         GAGDQG MFG+AT ETP++MPL   LA +L  +L  VRK+GT  +LRPDGKTQVT+ Y
Sbjct:   12 VTEGHPDKICDQISDSILDALLAVDEHSRVAVETLVTTGLVHVAGEVTTKGYVEIPALVRDTIVEIGYDSSDVSFDGTQCGVSVSIGAQSPDIAQGVDNALETRSERSQDDLDRQGAGDQGIMFGFATTETPQYMPLPIWLAHRLAERLAAVRKDGTLGYLRPDGKTQVTIGY 184          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NITOC6.782e-4452.66S-adenosylmethionine synthetase OS=Nitrosococcus o... [more]
METK_KOSOT6.782e-4455.23S-adenosylmethionine synthetase OS=Kosmotoga olear... [more]
METK_ACIBY6.782e-4452.98S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBT6.782e-4452.98S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS6.782e-4452.98S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC6.782e-4452.98S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_PSYA28.858e-4453.61S-adenosylmethionine synthetase OS=Psychrobacter a... [more]
METK_MYCSM8.858e-4456.07S-adenosylmethionine synthetase OS=Mycobacterium s... [more]
METK_MYCS28.858e-4456.07S-adenosylmethionine synthetase OS=Mycobacterium s... [more]
METK_LEIXX8.858e-4456.07S-adenosylmethionine synthetase OS=Leifsonia xyli ... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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