CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LEGPL (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Lens) GN=metK PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44
Identity = 92/166 (55.42%), Postives = 115/166 (69.28%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QDP ++VACE   KT +V+V GEITTKA V+ E I R   ++IG+ S  +G D ++C VL  I +QSPDIAQGV    +K    +GAGDQG MFGYA+ ET  FMP     A +L  KL + RK+G  PWLRPD K Q+T++Y
Sbjct:   12 VSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEDITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKY 174          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_DESAD (S-adenosylmethionine synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=metK PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44
Identity = 90/166 (54.22%), Postives = 111/166 (66.87%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISD+ILDA L QD D++VACET   T +  + GEI+T    ++++IVRDT R IG+   D+G DAD C V+  I++QS DIAQGV       PE  GAGDQG MFG+A  ET   MP     A +L  KLTEVRK+ T  +LRPDGKT+V  EY
Sbjct:   15 VTEGHPDKVADQISDSILDAILAQDKDARVACETLVTTGMAFIAGEISTTGYADFQQIVRDTIREIGYVHSDMGFDADTCAVISSIDKQSVDIAQGVD---RNTPESQGAGDQGMMFGFACKETEALMPAPIYYAHKLSRKLTEVRKDATLDYLRPDGKTEVAFEY 177          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ALHEH (S-adenosylmethionine synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metK PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44
Identity = 85/166 (51.20%), Postives = 114/166 (68.67%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA L +DP  ++ACET  KT ++++ GE+TT AN++YE + R+T + IG+   ++G D + C V+  + +QS DIAQGV       PEE GAGDQG MFGYA++ET   MP     A +L  +  EVR NG  PWLRPD K+QVT+ Y
Sbjct:   11 VSEGHPDKMADQISDAVLDAILAEDPRGRIACETMIKTGIIILGGEVTTSANIDYEAVARETVKRIGYKHHEMGFDGETCGVINILGKQSVDIAQGVD---RDHPEEQGAGDQGLMFGYASNETDVLMPAPITYAHRLVQRQAEVRCNGQLPWLRPDAKSQVTLRY 173          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.157e-43
Identity = 87/166 (52.41%), Postives = 116/166 (69.88%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQ+SDA+LDA L QD  ++VACET   T L ++ GEITT A ++Y +I R T + IG+ S D+G D + C VLV + +QSPDIAQGV        ++ GAGDQG MFGYA +ETP  MP+   LA +L  + +E+RK+G  PWLRPD K+QV++ Y
Sbjct:   12 VSEGHPDKMADQVSDAVLDAILTQDKHARVACETLLTTGLCVIAGEITTTAVIDYNQIARQTIKRIGYDSSDIGFDYNTCSVLVTVGKQSPDIAQGVDRAHDDYLDQ-GAGDQGLMFGYACNETPVLMPMPIHLAHRLTERQSELRKDGRLPWLRPDAKSQVSIRY 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PSEMY (S-adenosylmethionine synthetase OS=Pseudomonas mendocina (strain ymp) GN=metK PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.157e-43
Identity = 90/168 (53.57%), Postives = 115/168 (68.45%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDA+LDA + QD  ++VA ET  KT + +V GE+TT A V+ E+IVRD   NIG+ S DVG D + C ++  I +QSPDI QGV      +PE+ GAGDQG MFGYA++ET   MP   VL+ +L  +  E RK+G  PWLRPD K+QVT  Y N
Sbjct:   12 VSEGHPDKIADQISDAVLDAIIVQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICNIGYTSSDVGFDGNTCGIINIIGKQSPDINQGVD---RAKPEDQGAGDQGLMFGYASNETDVLMPAPIVLSHRLVERQAEARKSGLLPWLRPDAKSQVTCRYEN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.157e-43
Identity = 90/172 (52.33%), Postives = 117/172 (68.02%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDV-GLDADNCKVLVYIEQQSPDIAQGV---HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V EGHPDK+CDQISDA+LDA L QDP S+VACE    T L ++ GE+T+ A V++  +VR   + IG+      G DA++C VLV +++QSPDIA+GV     H     ++IGAGDQG MFGYA +ETPE MPL   LA +L  +L ++R  GT  +L PDGKTQV+V Y N
Sbjct:   11 VTEGHPDKICDQISDAVLDALLTQDPHSRVACEAVVNTGLCLITGEVTSTAEVDFINLVRSVIKEIGYKDAQAGGFDANSCAVLVALDKQSPDIAKGVDTAEDHTDDPFDKIGAGDQGIMFGYACNETPELMPLPISLAHRLARQLAKIRHQGTLKYLLPDGKTQVSVIYEN 182          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CLAMS (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=metK PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.157e-43
Identity = 95/174 (54.60%), Postives = 111/174 (63.79%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI--------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD+ILDA L QDP S+ A ET   T LV V GE+TT   V+  +IVRD  R+IG+ S +VG D  NC V V I  QSPDIAQGV      R            GAGDQG MFGYA+ +TP FMPL   LA +L  +L  VR +G   +LRPDGKTQVT+ Y
Sbjct:   12 VTEGHPDKICDQISDSILDALLTQDPSSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAERLAAVRHSGELSYLRPDGKTQVTIGY 185          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ACIAC (S-adenosylmethionine synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=metK PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.157e-43
Identity = 91/166 (54.82%), Postives = 115/166 (69.28%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA   +DP S+VA ET T T LV++ GEITT A+V+Y ++ RDT + IG+ + D G+D   C VLV  ++QS DIAQGV  H S      GAGDQG MFGYA DETPE MP     A +L  +  ++RK+G  P+LRPD K+QVT+ Y
Sbjct:   12 VSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRY 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_MYCMS (S-adenosylmethionine synthetase OS=Mycoplasma mycoides subsp. mycoides SC GN=metK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.511e-43
Identity = 87/168 (51.79%), Postives = 119/168 (70.83%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+CDQISDAILD  L+QD ++KVACE    TN +++ G+I++ A VNYE++ RD  +  G+  D  G++A+ CK+ + IE QSPDIAQGV   LS   ++IGAGDQG MFGYAT+E+  ++PL+  +A +L    T  RK G   W RPD K+QVT++Y N
Sbjct:   15 VSEGHPDKICDQISDAILDEVLKQDKNAKVACEVFATTNYLLIGGQISSTAIVNYEQVARDVLKKNGYVDDAYGINANTCKIDIKIESQSPDIAQGV--ELSN--DQIGAGDQGIMFGYATNESKTYLPLAITIAHELVYNATSQRKKGLFKWARPDMKSQVTIDYTN 178          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_LARHH (S-adenosylmethionine synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=metK PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.511e-43
Identity = 91/169 (53.85%), Postives = 115/169 (68.05%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 514
            V+EGHPDK+ DQISDAILDA L QD  ++VA ET   T LV++ GEITT ANV+Y  + R+T + IG+ + D+G DA  C VLV  ++QSPDIAQGV+        + GAGDQG MFGYA DETP  MP     A +L  +  E+RK+G  PWLRPD K+Q+T  Y +E
Sbjct:   11 VSEGHPDKVADQISDAILDAILTQDKHARVAAETLVNTGLVVLAGEITTHANVDYIHVARETIKRIGYNTSDLGFDAKGCAVLVGYDKQSPDIAQGVNEGQGIDLNQ-GAGDQGLMFGYACDETPTLMPFPIYYAHRLVQRQAELRKDGRLPWLRPDAKSQITCAYDSE 178          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEGPL8.858e-4455.42S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_DESAD8.858e-4454.22S-adenosylmethionine synthetase OS=Desulfovibrio s... [more]
METK_ALHEH8.858e-4451.20S-adenosylmethionine synthetase OS=Alkalilimnicola... [more]
METK_THIDA1.157e-4352.41S-adenosylmethionine synthetase OS=Thiobacillus de... [more]
METK_PSEMY1.157e-4353.57S-adenosylmethionine synthetase OS=Pseudomonas men... [more]
METK_PROM41.157e-4352.33S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_CLAMS1.157e-4354.60S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_ACIAC1.157e-4354.82S-adenosylmethionine synthetase OS=Acidovorax aven... [more]
METK_MYCMS1.511e-4351.79S-adenosylmethionine synthetase OS=Mycoplasma myco... [more]
METK_LARHH1.511e-4353.85S-adenosylmethionine synthetase OS=Laribacter hong... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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