CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_COLP3 (S-adenosylmethionine synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=metK PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 5.741e-43
Identity = 86/166 (51.81%), Postives = 112/166 (67.47%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT + ++ GE++T A V+ EK+ R+   +IG+ S DVG D   C ++  I QQSP+IAQGV       PEE GAGDQG MFGYAT+ETP  MP     + +L  +  E RK+G  PWLRPD K+QVT  Y
Sbjct:   11 VSEGHPDKIADQISDAVLDAIIAKDKHARVACETMVKTGVAIISGEVSTNAWVDLEKLTRNVISDIGYTSSDVGFDGATCGIMNLIGQQSPEIAQGVD---RSNPEEQGAGDQGLMFGYATNETPTLMPAPLYYSHRLVERQAEARKSGVLPWLRPDAKSQVTFIY 173          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PSYWF (S-adenosylmethionine synthetase OS=Psychrobacter sp. (strain PRwf-1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.499e-43
Identity = 86/168 (51.19%), Postives = 117/168 (69.64%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT  V++ GEI+T AN++ E+IVRDT  +IG+   D+G D + C V+  I +QSP+IAQGV       PE+ GAGDQG MFGYA++ET   MP     A +L  + +E+R++G   WLRPD K QVT++Y N
Sbjct:   12 VSEGHPDKMADQISDALLDAIMREDLHARVACETLVKTGAVVLAGEISTTANIDIERIVRDTVNSIGYNHSDLGFDGETCAVINMIGKQSPEIAQGVD---RMNPEDQGAGDQGLMFGYASNETEVLMPAPIEFAHRLMERQSELRRSGELKWLRPDAKAQVTLKYTN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.499e-43
Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISDA+LD  L QDP+S+VACET   T + ++ GEITT+   +   +VR+T RNIG+ S ++G D   C V+  I++QS DIAQGV    +   E+ GAGDQG MFG+A DET   MP     A QL  +LTEVRK+GT    RPDGKTQV+ EY
Sbjct:   15 VTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVDRATN---EDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEY 177          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.499e-43
Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISDA+LD  L QDP+S+VACET   T + ++ GEITT+   +   +VR+T RNIG+ S ++G D   C V+  I++QS DIAQGV    +   E+ GAGDQG MFG+A DET   MP     A QL  +LTEVRK+GT    RPDGKTQV+ EY
Sbjct:   15 VTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVDRATN---EDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEY 177          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_BLOFL (S-adenosylmethionine synthetase OS=Blochmannia floridanus GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.499e-43
Identity = 88/166 (53.01%), Postives = 118/166 (71.08%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+ GHPDK+ DQISD+ILD+ LEQDP ++VACET  KT +V++ GEITT A+VN EKI R+T + IG+    +GLDA++C +L  I QQSP+I   ++ H S R ++ GAGDQG MFGYAT+ET   MP     A +L  + +++RKNGT PWL  D K+Q+T  Y
Sbjct:   11 VSAGHPDKIADQISDSILDSILEQDPKARVACETYIKTGIVLIGGEITTTASVNIEKIARNTIQEIGYTHPKMGLDANSCVILSVINQQSPEIQYSIN-HDSDRTQQ-GAGDQGSMFGYATNETDVLMPAPITYAHRLIQRKSKLRKNGTLPWLGLDAKSQITFAY 174          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_BAUCH (S-adenosylmethionine synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.499e-43
Identity = 88/166 (53.01%), Postives = 117/166 (70.48%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISD +LDA L QD  ++VACET  KT +V+V GEITT A ++ E++ R+T R+IG+ + ++  DA++C VL  I +QSPDI +G++   +  P E GAGDQG MFGYAT+ET   MP     A +L A+ + VRKNGT PWL PD K+QVT  Y
Sbjct:   11 VSEGHPDKIADQISDTVLDAILAQDLKARVACETYVKTGMVLVGGEITTNAWIDIEELTRNTIRDIGYTNSEMKFDANSCAVLSIISKQSPDINKGIN---NIDPREQGAGDQGFMFGYATNETDVLMPAPITYAHRLVARQSLVRKNGTLPWLCPDAKSQVTFAY 173          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_ACAM1 (S-adenosylmethionine synthetase OS=Acaryochloris marina (strain MBIC 11017) GN=metK PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.499e-43
Identity = 94/173 (54.34%), Postives = 114/173 (65.90%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE-------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD ILDA L QDP S+VA E    T LV++ GEITTKA VN+  +VR     IG+   D G  A++C VLV +++QSPDIAQGV      R E+       IGAGDQG MFG+A +ETPE MPL   LA ++  +L  VRK     +LRPDGK+QVTV Y
Sbjct:   12 VTEGHPDKVCDQISDTILDALLSQDPASRVAAEVVVNTGLVLLTGEITTKAQVNFVDLVRQKITEIGYTDSDNGFAANSCSVLVALDEQSPDIAQGVDSAQETREEKSDQELDAIGAGDQGLMFGFACNETPELMPLPISLAHRVTRRLAAVRKT-QLGYLRPDGKSQVTVTY 183          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.793e-43
Identity = 90/166 (54.22%), Postives = 114/166 (68.67%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QD  ++VA ET   T LV++ GEITT ANV+Y  + R+T + IG+ + + G+D   C VLV  ++QSPDIAQGV    S      GAGDQG MFGYA DETPE MP     A +L  + +++R++G  PWLRPD K+QVTV Y
Sbjct:   12 VSEGHPDKVADQISDAILDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIHVARETIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV-DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSQLRRDGRLPWLRPDAKSQVTVRY 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.793e-43
Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MP+   L+ +L  + +++R++G   WLRPD K+QVT+ Y
Sbjct:   12 VSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRY 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.793e-43
Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISD+ILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MPL   L+ +L  + +++R++G   WLRPD K+QVT+ Y
Sbjct:   12 VSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRY 176          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_COLP35.741e-4351.81S-adenosylmethionine synthetase OS=Colwellia psych... [more]
METK_PSYWF7.499e-4351.19S-adenosylmethionine synthetase OS=Psychrobacter s... [more]
METK_DESVV7.499e-4353.61S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESVH7.499e-4353.61S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_BLOFL7.499e-4353.01S-adenosylmethionine synthetase OS=Blochmannia flo... [more]
METK_BAUCH7.499e-4353.01S-adenosylmethionine synthetase OS=Baumannia cicad... [more]
METK_ACAM17.499e-4354.34S-adenosylmethionine synthetase OS=Acaryochloris m... [more]
METK_RALPJ9.793e-4354.22S-adenosylmethionine synthetase OS=Ralstonia picke... [more]
METK_POLSQ9.793e-4353.61S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_POLNS9.793e-4353.61S-adenosylmethionine synthetase OS=Polynucleobacte... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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