CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.793e-43
Identity = 89/168 (52.98%), Postives = 113/168 (67.26%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDKL DQISDA+LDA L  DP ++VACET  KT + +V GEITT A V+ E +VR   ++I + S +VG D D C V+  I +QS DIAQGV     ++PE+ GAGDQG MFGYA++ET   MP     + +L  +  E RK+G  PWLRPD K+QVT  Y N
Sbjct:   12 VSEGHPDKLADQISDAVLDAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYDGDTCGVINIIGKQSVDIAQGVD---RQKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHRLVQRQAEARKSGLLPWLRPDAKSQVTCRYEN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CYAA5 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain ATCC 51142) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.793e-43
Identity = 88/173 (50.87%), Postives = 114/173 (65.90%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD I+D  L  D  S+VA E    T LV++ GE+T+KANVN+ ++ R     IG+ + D G  A++C VLV +++QSPDIAQGV     +R        ++IGAGDQG MFGYA +ETPE MPL   LA +   +L  VRK G   +LRPDGKTQV++ Y
Sbjct:   12 VTEGHPDKICDQISDTIIDTLLYHDDQSRVAAEVVVNTGLVLITGEVTSKANVNFVELARKKIAEIGYTNADNGFSANSCAVLVALDEQSPDIAQGVTQAHEQRQALSDDELDQIGAGDQGIMFGYACNETPELMPLPISLAHRFSRRLAAVRKTGDLGYLRPDGKTQVSIVY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CORA7 (S-adenosylmethionine synthetase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=metK PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 9.793e-43
Identity = 95/172 (55.23%), Postives = 106/172 (61.63%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR------PEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CD ISDAILDA LE+DPD+ VA ET   T  V V GE+ T   V   +IVR T   IGF S DVG D   C V V I +QS +I  GV      R       ++ GAGDQG MFGYAT+ETPEFMPL    A  L  +LT VRK G  P LRPDGKTQVT  Y
Sbjct:   17 VTEGHPDKICDAISDAILDALLEEDPDAHVAVETLVTTGQVHVVGEVRTSGYVEIPQIVRKTLVEIGFTSSDVGFDGHTCGVNVAIGEQSQEIGAGVDASTEVRSGTFEDDDQYGAGDQGLMFGYATNETPEFMPLPISTAHHLSRRLTHVRKEGIVPSLRPDGKTQVTFAY 188          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STAHJ (S-adenosylmethionine synthetase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.279e-42
Identity = 91/173 (52.60%), Postives = 116/173 (67.05%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D     VL  I++QSPDIAQGV   L  R     EEI   GAGDQG MFGYAT+ET  +MPL   L+ QL  +L++VRK+G   +LRPDGK QVTVEY
Sbjct:   13 VTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTSTYVDIPKVVRETIKGIGYTRAKYGYDYQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATNETETYMPLPIFLSHQLAKRLSDVRKDGILNYLRPDGKVQVTVEY 185          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STAES (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.279e-42
Identity = 91/173 (52.60%), Postives = 116/173 (67.05%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T ++IG+     G D+    VL  I++QSPDIAQGV   L  R     EEI   GAGDQG MFGYATDET  +MPL   L+ QL  +L +VRK+    +LRPDGK QVTVEY
Sbjct:   13 VTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATDETDTYMPLPIFLSHQLAKRLADVRKDEILDYLRPDGKVQVTVEY 185          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STAEQ (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.279e-42
Identity = 91/173 (52.60%), Postives = 116/173 (67.05%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T ++IG+     G D+    VL  I++QSPDIAQGV   L  R     EEI   GAGDQG MFGYATDET  +MPL   L+ QL  +L +VRK+    +LRPDGK QVTVEY
Sbjct:   13 VTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATDETDTYMPLPIFLSHQLAKRLADVRKDEILDYLRPDGKVQVTVEY 185          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PSEFS (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.279e-42
Identity = 87/166 (52.41%), Postives = 112/166 (67.47%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT + ++ GE+TT A V+ E+IVRD   +IG+ S DVG D   C V+  I +QSPDI QGV      +PE+ GAGDQG MFGYA++ET   MP     + QL  +  E RK+G  PWLRPD K+QVT  Y
Sbjct:   12 VSEGHPDKIADQISDAVLDAIIAEDKFARVACETLVKTGVAIIAGEVTTTAWVDLEQIVRDVITDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHQLVQRQAEARKSGLLPWLRPDAKSQVTCRY 174          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_PROMP (S-adenosylmethionine synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.279e-42
Identity = 89/170 (52.35%), Postives = 121/170 (71.18%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGF-ASDDVGLDADNCKVLVYIEQQSPDIAQGVH--GHLSKRPE-EIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISDA+LDA L +DP+S+VACET   T L ++ GEIT++A ++Y K+VR   + IG+  S   G D+++C VLV +++QSPDI+QGV+    +++  E   GAGDQG MFGYA DETPE MPL   LA +L  +L +VR      +L PDGKTQV+++Y
Sbjct:   11 VTEGHPDKICDQISDAVLDALLSEDPESRVACETVVNTGLCLLTGEITSRAKLDYIKLVRKVIKEIGYEGSKAGGFDSNSCAVLVALDEQSPDISQGVNEADDINEDLENNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEKVLDYLLPDGKTQVSIDY 180          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_MICAN (S-adenosylmethionine synthetase OS=Microcystis aeruginosa (strain NIES-843) GN=metK PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.279e-42
Identity = 89/173 (51.45%), Postives = 116/173 (67.05%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+CDQISD ILDA L QD  S+VA E    T LV++ GEIT+KA V++  +VR     IG+ + D G  +++C VLV +++QSPDI+QGV      R        ++IGAGDQG +FG+A +ETPEFMPL   LA ++  +L  VRK G   +LRPDGKTQV+V Y
Sbjct:   12 VTEGHPDKICDQISDTILDALLSQDDHSRVAAEVVVNTGLVLITGEITSKAQVHFVDLVRKKIAEIGYINADNGFSSNSCTVLVALDEQSPDISQGVTAAQENRELLSNDELDKIGAGDQGIVFGFACNETPEFMPLPISLAHRIARRLAAVRKTGELSYLRPDGKTQVSVIY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STRSY (S-adenosylmethionine synthetase OS=Streptococcus suis (strain 05ZYH33) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.670e-42
Identity = 92/173 (53.18%), Postives = 116/173 (67.05%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE-------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L +DPD+ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+   + G  A++  V   + +QSPDIAQGV+  L  R +        IGAGDQG MFG+A DETPE MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDAILAEDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTKGEYGFSAESVGVHPSLVEQSPDIAQGVNEALETRQDASQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRLAELRKSGEIAYLRPDAKSQVTVEY 184          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MARAV9.793e-4352.98S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_CYAA59.793e-4350.87S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_CORA79.793e-4355.23S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_STAHJ1.279e-4252.60S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAES1.279e-4252.60S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAEQ1.279e-4252.60S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_PSEFS1.279e-4252.41S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_PROMP1.279e-4252.35S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_MICAN1.279e-4251.45S-adenosylmethionine synthetase OS=Microcystis aer... [more]
METK_STRSY1.670e-4253.18S-adenosylmethionine synthetase OS=Streptococcus s... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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