CX299677

Overview
NameCX299677
Unique NameCX299677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length516
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_RHOFD (S-adenosylmethionine synthetase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.182e-42
Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA  +QDP S+VA ET   T LV++ GEITT A+V+Y ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H S      GAGDQG MFGYA +ETPE MP     A +L  +  ++RK+G  P+LRPD K+Q+T+ Y
Sbjct:   12 VSEGHPDKVADQISDAILDAIFKQDPKSRVAAETLCNTGLVVLAGEITTNAHVDYIQVARDTLKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACNETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQITMHY 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STRFR (S-adenosylmethionine synthetase OS=Streptomyces fradiae GN=metK PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.849e-42
Identity = 93/178 (52.25%), Postives = 114/178 (64.04%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP------------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ D+ISD +LDA L +DP ++VA ET   T  V + GE+TT A     ++VRDT  +IG+ S   G D  +C V V I  QSPDIA+GV     +R             +  GAGDQG MFGYA DETPE MPL   LA +L  +L+EVRKNGT P+LRPDGKTQVT+EY
Sbjct:   11 VTEGHPDKIADRISDTVLDALLARDPRARVAVETLITTGQVHIAGEVTTTAYAPIAQLVRDTVLSIGYDSSAKGFDGASCGVSVSIGAQSPDIARGVDTAYERRGGGTAPGGPGDELDRQGAGDQGLMFGYACDETPELMPLPINLAHRLSRRLSEVRKNGTIPYLRPDGKTQVTIEY 188          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_IDILO (S-adenosylmethionine synthetase OS=Idiomarina loihiensis GN=metK PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.721e-42
Identity = 89/168 (52.98%), Postives = 114/168 (67.86%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDA+LDA L +DP ++VACET  KT +V+V GEI+TKA V+ E + R T ++IG+   D+G D  +C VL  I +QS DI QGV       PEE GAGDQG MFGYA++ET   MP     A ++  + +EVR NGT  WLRPD K+Q+T  Y N
Sbjct:   11 VSEGHPDKIADQISDAVLDAILAKDPKARVACETYVKTGMVLVGGEISTKAWVDVEDLARQTVKDIGYRHSDMGFDGASCAVLNAIGKQSGDINQGVD---RANPEEQGAGDQGLMFGYASNETSVLMPAPITYAHRVMQRQSEVRNNGTLDWLRPDAKSQLTFVYEN 175          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.721e-42
Identity = 86/168 (51.19%), Postives = 111/168 (66.07%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDA+LDA + QDP+ +VACE   K+ +V V GEITT A  + E+I R+T   IG+    +G D + C V+  I +QSPDI  GV G   +  +E+GAGDQG MFGYA+ ET  FMP     A +L  +   +RKNG  PWLRPD K+QVT+ Y N
Sbjct:   12 VSEGHPDKVADQISDAVLDALISQDPNCRVACEAVVKSGMVFVAGEITTNAWADVEQITRNTVLQIGYNDPHLGFDGETCAVVTAIGKQSPDIVMGVDG---REDQELGAGDQGLMFGYASRETDVFMPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRYEN 176          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_CHRSD (S-adenosylmethionine synthetase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metK PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.721e-42
Identity = 87/166 (52.41%), Postives = 113/166 (68.07%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT + +V GEITT A V+ E +VR    +IG+ S DVG D + C VL  I +QS DIAQGV      +PE+ GAGDQG MFGYAT+ET  +MP     + +L  +  E+RK+G  PWLRPD K+Q+T  Y
Sbjct:   12 VSEGHPDKIADQISDAVLDAIIARDKQARVACETMVKTGVAIVAGEITTSAWVDLEDLVRRVINDIGYTSSDVGFDGNTCGVLNLIGKQSVDIAQGVD---RSKPEDQGAGDQGLMFGYATNETDSYMPAPIHYSHRLVERQAELRKHGLLPWLRPDAKSQLTFRY 174          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_SYNP6 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=metK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.860e-42
Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGV-------HGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            + EGHPDK+CDQISD ILDA L +DP S+VA E    T LV++ GE++T+A  N   + R      G+  +D G  A+NC VL+ +++QSPDIAQGV            +R + IGAGDQG MFGYA +E PE MPL   L+ +L  +L  VR NG   +LRPDGKTQVT+ Y
Sbjct:    1 MTEGHPDKICDQISDTILDALLTEDPSSRVAAEVVVNTGLVLITGEVSTQAQTNLIDLARRKIAETGYTGEDSGFGANNCTVLIALDKQSPDIAQGVDTAQEQRQASSDERFDSIGAGDQGIMFGYACNEAPELMPLPISLSHRLARQLAVVRHNGQLDYLRPDGKTQVTIAY 173          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_SYNFM (S-adenosylmethionine synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=metK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.860e-42
Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQISD+ILDA + +D  ++VACET   T L  V GEITT + V+   I+R T + IG+    +G D   C V+  I++QSPDIAQGV+       EE GAGDQG MFG+A +ETP FMP+    A ++  KL EVRKNG   +LRPDGK+QVTVEY
Sbjct:   13 VTEGHPDKVADQISDSILDAIITEDKTARVACETLVTTGLAFVAGEITTSSWVDIPDIIRSTIKGIGYNDSSMGFDWSTCAVITSIDKQSPDIAQGVNPG-EGLFEEQGAGDQGLMFGFACNETPVFMPMPIYYAHRITRKLAEVRKNGVLEFLRPDGKSQVTVEY 177          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STRT2 (S-adenosylmethionine synthetase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=metK PE=3 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 4.860e-42
Identity = 92/173 (53.18%), Postives = 118/173 (68.21%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V+EGHPDK+ DQISDAILDA L +DPD+ VA ET   T  V VFGE++T A V+  ++VRDT   IG+ + + G  A++  V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DETPEFMPL   L+ +L  KL ++RK+G   +LRPD K+QVTVEY
Sbjct:   12 VSEGHPDKIADQISDAILDAILAEDPDAHVAAETAVYTGSVHVFGEVSTTAYVDINRVVRDTIAEIGYNNAEYGFAAESVGVHPSLIEQSPDIAQGVNESLEVRGTGDQDSLDLIGAGDQGLMFGFAIDETPEFMPLPVSLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEY 184          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STRMK (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=metK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.860e-42
Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCP--WLRPDGKTQVTVEYYN 511
            V+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT + +V GEITT A ++ E + R    +IG+ S DVG D   C VL  I +QSP IAQGV     K+PEE+GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++RK    P  WLRPD K+QVT+ Y N
Sbjct:   11 VSEGHPDKVADQISDAVLDAILTQDQRARVACETMVKTGVAIVAGEITTSAWIDLEALTRKVITDIGYDSSDVGFDGATCGVLNLIGKQSPHIAQGVD---RKKPEEMGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSPLSWLRPDAKSQVTLRYEN 177          
BLAST of CX299677 vs. ExPASy Swiss-Prot
Match: METK_STAS1 (S-adenosylmethionine synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=metK PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.860e-42
Identity = 88/173 (50.87%), Postives = 114/173 (65.90%), Query Frame = 2
Query:    8 VNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFASDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY 505
            V EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T + IG+     G D+    VL  I++QSPDIAQGV   L  R        E  GAGDQG MFGYAT+ET  +MPL   L+ QL  +L++VRK+    +LRPDGK QVTVEY
Sbjct:   13 VTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKEIGYTRAKFGYDSQTMAVLTAIDEQSPDIAQGVDTALEYRDEASEAEIEATGAGDQGLMFGYATNETDTYMPLPIFLSHQLAKRLSDVRKDEILKYLRPDGKVQVTVEY 185          
The following BLAST results are available for this feature:
BLAST of CX299677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_RHOFD2.182e-4253.01S-adenosylmethionine synthetase OS=Rhodoferax ferr... [more]
METK_STRFR2.849e-4252.25S-adenosylmethionine synthetase OS=Streptomyces fr... [more]
METK_IDILO3.721e-4252.98S-adenosylmethionine synthetase OS=Idiomarina loih... [more]
METK_COXBN3.721e-4251.19S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CHRSD3.721e-4252.41S-adenosylmethionine synthetase OS=Chromohalobacte... [more]
METK_SYNP64.860e-4249.71S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SYNFM4.860e-4253.61S-adenosylmethionine synthetase OS=Syntrophobacter... [more]
METK_STRT24.860e-4253.18S-adenosylmethionine synthetase OS=Streptococcus t... [more]
METK_STRMK4.860e-4252.94S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_STAS14.860e-4250.87S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionC07001A05SK NTLeaf1 Citrus clementina cDNA clone C07001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299677 ID=CX299677; Name=CX299677; organism=Citrus clementina; type=EST; length=516bp
CACGAGGGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCG
ATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCT
TGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCAC
AACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCA
ACATTGGATTTGCCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAG
GTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCA
TGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGC
ATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGT
CATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAA
TGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTG
AGTATTACAATGAGAA
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