CX299679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: KDSD_YERPE (Arabinose 5-phosphate isomerase OS=Yersinia pestis GN=kdsD PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.923e-23 Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 10 LVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR 414 L+ ++S + + D+++ + V +E CP LAP TST +V GD +A+A++ AR T++++A +HP G +G+ L+ ++ D+M E+P + D L+E+T K G ++ D+ + G FTDGDLRR Sbjct: 126 LICMSSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGALGRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDLRR 260
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: GUTQ_ECOLI (Protein gutQ OS=Escherichia coli (strain K12) GN=gutQ PE=3 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 1.773e-20 Identity = 53/131 (40.46%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 22 TSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR 414 TS G A AV D++V ERE CP LAP +ST ++ GD +A+A+M AR +++A +HPAG +G L+ KV +M+ +P +MD ++EL+ G G + V D + + G FTDGDLRR Sbjct: 127 TSPLGLAAKAVLDISV----EREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRR 253
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: Y1429_HELPY (Uncharacterized protein HP_1429 OS=Helicobacter pylori GN=HP_1429 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.149e-19 Identity = 42/135 (31.11%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 10 LVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR 414 +++ T ++L+ + D + L +++E CP + AP TST + + GD + +M A+N +++++A+ HP G +GK L KV+D+++ LP+ D L+E++ K G ++++E L+G +DGD+RR Sbjct: 126 IITFTKSPNSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQT-TNLPLIAPSTSFKDALIEMSEKRLGSAILVNEANELVGVLSDGDVRR 259
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: YE29_HELPJ (Uncharacterized protein jhp_1324 OS=Helicobacter pylori J99 GN=jhp_1324 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.368e-19 Identity = 41/135 (30.37%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 10 LVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR 414 +++ T ++L+ + D + L +++E CP + AP TST + + GD + +M A+N +++++A+ HP G +GK L KV+D+++ LP+ D L+E++ K G +++++ L+G +DGD+RR Sbjct: 126 IITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQT-TNLPLIAPSTSFKDALIEMSEKRLGSAILVNDNNELVGVLSDGDVRR 259
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: Y1678_HAEIN (Probable phosphosugar isomerase HI1678 OS=Haemophilus influenzae GN=HI1678 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.397e-17 Identity = 50/138 (36.23%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 1 GAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR 414 G +++VTS + + LA D + + VERE+CP +LAP TS + + GD +A++++ ARN ++A HP G +G+ L+ KV+D M+ LP D L + G LV++ E L G TDGD+RR Sbjct: 140 GNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQ--TRLPTILPTTNFTDCLTVMNEGRMGVALVMENE-QLKGIITDGDIRR 274
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: KPSF5_ECOLX (Polysialic acid capsule expression protein kpsF OS=Escherichia coli GN=kpsF PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.130e-17 Identity = 50/139 (35.97%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 1 GAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGC-GCLLVIDEEYHLIGTFTDGDLRR 414 G ++++T+ + LA D + L + E CP +LAP TST + M GD +AIAM+ R +++A HP G +G+ L+ +V DVM+ ++P + D +++ + GC G ++V D E L G TDGDLRR Sbjct: 130 GNRIIAITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFARYHPGGSLGRRLLTRVADVMQ--HDVPAV-QLDASFKTVIQRITSGCQGMVMVEDAEGGLAGIITDGDLRR 265
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: KPSF1_ECOLX (Polysialic acid capsule expression protein kpsF OS=Escherichia coli GN=kpsF PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.130e-17 Identity = 50/139 (35.97%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 1 GAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGC-GCLLVIDEEYHLIGTFTDGDLRR 414 G ++++T+ + LA D + L + E CP +LAP TST + M GD +AIAM+ R +++A HP G +G+ L+ +V DVM+ ++P + D +++ + GC G ++V D E L G TDGDLRR Sbjct: 130 GNRIIAITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDFARYHPGGSLGRRLLTRVADVMQ--HDVPAV-QLDASFKTVIQRITSGCQGMVMVEDAEGGLAGIITDGDLRR 265
BLAST of CX299679 vs. ExPASy Swiss-Prot
Match: Y505_RICPR (Uncharacterized protein RP505 OS=Rickettsia prowazekii GN=RP505 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.239e-14 Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 10 LVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPHKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR 414 + ++T + + LA D + +P +E P S+ I + GD + + R TRD++ HP G IG +L K++++M+ E+P+ E + ++ + K GC LV D+E +LIG TDGDLRR Sbjct: 121 IAAMTMNKNSTLAKRSDFLLKIPECQEASLIG-TPTISSLIMLSLGDAIMTVIHEERGFTRDDFKIYHPGGTIGANLT-KIKNIMRSGDEIPLVYEDTSFTETIIIMNKKRLGCTLVTDKEQNLIGIITDGDLRR 253 The following BLAST results are available for this feature:
BLAST of CX299679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299679 ID=CX299679; Name=CX299679; organism=Citrus clementina; type=EST; length=414bpback to top |