CX299680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_RICTY (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia typhi GN=sdhA PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 5.752e-60 Identity = 105/160 (65.62%), Postives = 123/160 (76.88%), Query Frame = 2 Query: 50 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKH 529 T Y I+ H +D +++ G NTACITK+FPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTEDGKIYQR FGG + + GKG A R AADRTGHA+LHTLY Q++KH Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKIFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEDGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKH 161
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_RICFE (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia felis GN=sdhA PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 9.812e-60 Identity = 105/160 (65.62%), Postives = 123/160 (76.88%), Query Frame = 2 Query: 50 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKH 529 T Y I+ H +D +++ G NTACITKLFPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTE+GKIYQR FGG + + GKG A R AADRTGHA+LHTLY Q++KH Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKLFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKH 161
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_RICCN (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia conorii GN=sdhA PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 9.812e-60 Identity = 105/160 (65.62%), Postives = 123/160 (76.88%), Query Frame = 2 Query: 50 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKH 529 T Y I+ H +D +++ G NTACITKLFPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTE+GKIYQR FGG + + GKG A R AADRTGHA+LHTLY Q++KH Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKLFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKH 161
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_RICPR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia prowazekii GN=sdhA PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 3.729e-59 Identity = 104/160 (65.00%), Postives = 122/160 (76.25%), Query Frame = 2 Query: 50 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKH 529 T Y I+ H +D +++ G NTACITK+FPTRSHTVAAQGGI+AALGNM EDDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRT DGKIYQR FGG + + GKG A R AADRTGHA+LHTLY Q++KH Sbjct: 2 TKAYNIIHHKFDVVVVGAGGAGLRSAFGMAKEGLNTACITKIFPTRSHTVAAQGGISAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTVDGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKH 161
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 4.870e-59 Identity = 104/160 (65.00%), Postives = 122/160 (76.25%), Query Frame = 2 Query: 50 TGGYTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKH 529 T Y I+ H +D ++E G NTACI+KLFPTRSHTVAAQGGI+AALGNM DDWRWHMYDTVKGSDWLGDQDAI+YMC+ AP A++ELE+YG+PFSRTE+GKIYQR FGG + + GKG A R AADRTGHA+LHTLY Q++KH Sbjct: 2 TKSYNIIHHKFDVIVVGAGGAGLRAAFGMAEEGLNTACISKLFPTRSHTVAAQGGISAALGNMGADDWRWHMYDTVKGSDWLGDQDAIEYMCKNAPDAILELEHYGVPFSRTEEGKIYQRPFGGMTTEYGKGKAAQRTCAAADRTGHAILHTLYQQSLKH 161
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_PARDE (Succinate dehydrogenase flavoprotein subunit OS=Paracoccus denitrificans GN=sdhA PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 8.895e-53 Identity = 95/156 (60.90%), Postives = 114/156 (73.08%), Query Frame = 2 Query: 59 YTIVDHTYDXXXXXXXXXXXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMK 526 Y H YD ++E G TAC+TK+FPTRSHTVAAQGGI A+L NM D+W+WHMYDTVKGSDWLGD DA++Y+ REAPKAV ELE+YG+PFSRTE+GKIYQR FGG + + G+G R AADRTGHA+LHTLYGQ++K Sbjct: 4 YKYETHEYDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPTRSHTVAAQGGIAASLSNMGPDNWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQRPFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLK 159
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_SALTY (Succinate dehydrogenase flavoprotein subunit OS=Salmonella typhimurium GN=sdhA PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 6.597e-48 Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 134 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT 535 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS + G G QA R A AADRTGHALLHTLY Q +K++T Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHT 158
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_ECOLI (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli (strain K12) GN=sdhA PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 6.597e-48 Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 134 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT 535 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS + G G QA R A AADRTGHALLHTLY Q +K++T Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHT 158
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_ECOL6 (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli O6 GN=sdhA PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 6.597e-48 Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 134 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT 535 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS + G G QA R A AADRTGHALLHTLY Q +K++T Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHT 158
BLAST of CX299680 vs. ExPASy Swiss-Prot
Match: DHSA_ECO57 (Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli O157:H7 GN=sdhA PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 6.597e-48 Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 2 Query: 134 LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDCGKGGQAYRCACAADRTGHALLHTLYGQAMKHNT 535 +S+ G A ++K+FPTRSHTV+AQGGI ALGN ED+W WHMYDTVKGSD++GDQDAI+YMC+ P+A++ELE+ GLPFSR +DG+IYQR FGGQS + G G QA R A AADRTGHALLHTLY Q +K++T Sbjct: 26 ISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFG-GEQAARTAAAADRTGHALLHTLYQQNLKNHT 158 The following BLAST results are available for this feature:
BLAST of CX299680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299680 ID=CX299680; Name=CX299680; organism=Citrus clementina; type=EST; length=535bpback to top |