CX299695

Overview
NameCX299695
Unique NameCX299695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 4.902e-33
Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHP-----FMSGGV---TVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510
            GL V ++I S GH+SGAH NP+++IAFA+ + FP+                    L+ VFH       + G V   T PS +   +F +EF+ TFNL+F            G  AGIA+GAT++L+IL +GP SGASMNP R+LGPA+  G YK LW+Y+V+P +GAL+GA  Y L++
Sbjct:   83 GLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWGCYKDLWLYIVSPVIGALSGAWTYGLLR 260          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 9.245e-32
Identity = 74/180 (41.11%), Postives = 99/180 (55.00%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVF----------HPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVK 510
            GL VM+++ +  HISGAH NP++T+AFA    F W                    L+ VF          H F     T P+ +  QA ALEF+I+F L+F            GELAG+AVGATV +N+L AGP +GASMNP R+LGPA+ AG Y  +W+Y+ AP  G + GA  Y L++
Sbjct:  104 GLVVMVLVYTVSHISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTLRVVFGGGGGGARGEHLFFG---TTPAGSMAQAAALEFVISFFLMFVVSGVATDNRAIGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGGVWVYVAAPVSGTVCGAWAYNLLR 280          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.060e-31
Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFH--PFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETP 540
            GL VM+++ + G+ISGAH NP++TI F+    FPW                    L  +F   P    G TVP  + GQ+ A+E +I+F L+F            G++AGIAVG T+ LN+ VAGP SGASMNP R++GPA+    Y  LW+Y+V P +G LAGA VY L++     ST+ P
Sbjct:   82 GLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFG-TVPVGSNGQSLAIEIIISFLLMFVISGVATDDRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKHVYTGLWVYVVGPIIGTLAGAFVYNLIR-----STDKP 257          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP71_ARATH (Probable aquaporin NIP7-1 OS=Arabidopsis thaliana GN=NIP7-1 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.019e-27
Identity = 64/173 (36.99%), Postives = 90/173 (52.02%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX-GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLR 516
            GL+V++V+ S GHISGAHLNPS+TIAFA    FPW                       V+        T P+++   AF +E + T  ++F             G L G  +G  + L +L+ GP SG SMNP R+LGPAV A +++ LWIY+ AP +GA+ G   Y  + L+
Sbjct:   86 GLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAATLVGVSVYGVNADIMATKPALSCVSAFFVELIATSIVVFLASALHCGPHQNLGNLTGFVIGTVISLGVLITGPISGGSMNPARSLGPAVVAWDFEDLWIYMTAPVIGAIIGVLTYRSISLK 258          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP21_ARATH (Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 8.381e-25
Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVF----------HPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507
            G+ +M+++   GH+S AH NP++T+A A+ + FP                     L+ +F          H    G  + PS +  QAF +EF+IT  L+              EL G+ +GATV LN++ AG  SGASMNP R++GPA+  G YK +WIYL+APTLGA++GA ++ ++
Sbjct:   88 GIVIMVLVYCLGHLS-AHFNPAVTLALASSQRFPLNQVPAYITVQVIGSTLASATLRLLFDLNNDVCSKKHDVFLG--SSPSGSDLQAFVMEFIITGFLMLVVCAVTTTKRTTEELEGLIIGATVTLNVIFAGEVSGASMNPARSIGPALVWGCYKGIWIYLLAPTLGAVSGALIHKML 263          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: NIP41_ORYSJ (Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.172e-18
Identity = 61/174 (35.06%), Postives = 76/174 (43.68%), Query Frame = 1
Query:    4 LAVMIVILSTGHISGAHLNPSLTIAFAALRHFP-WXXXXXXXXXXXXXXXXXXFALKGVFHP---FMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL 513
            +  M V      +  AH NP++TI FAA R FP W                   ++  V  P      G   V    T   F +EFL +  L+               + GIA+GA V    LV GP SG SMNP RTLGPA+  G Y  +WIY+VAP  G L GA     V+L
Sbjct:   94 VVAMTVAFVLSWLGPAHFNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHFYGTAPVVVHGTRLPFLMEFLASAVLMIVIATVATDGTAGKTVGGIAIGAAVGGLGLVIGPVSGGSMNPARTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRL 267          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 90.1225 bits (222), Expect = 7.598e-18
Identity = 60/186 (32.26%), Postives = 87/186 (46.77%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTV----PSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGE-LAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTL-VKLR-GDDSTET 537
            GL V  +  + GH+SG H+NP++TI                              +K      + GG+ V    P ++TGQ   +E LITF L+F             +  A +A+G ++    L A   +GASMNP R+ GPAV  GNY  LW+Y V P +G +   AVY L  K+R GD+ + +
Sbjct:   62 GLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRTDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGNYTDLWVYWVGPIVGGIVAGAVYRLFFKVRKGDEESNS 247          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 59/172 (34.30%), Postives = 79/172 (45.93%), Query Frame = 1
Query:   10 VMIVILSTG-HISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGG-------VTVPSVNTGQAFALEFLITFNLLF-XXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            V+ V++S G H+SG H+NP++T+  AA  H                       L       ++GG          P V   +A A+E ++TF+LLF             G L  + VG  V  NIL  GP SGASMNP R+ GPA+AAG +   WIY V P +G      VY
Sbjct:   65 VVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAA-----LTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVY 231          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.771e-17
Identity = 56/167 (33.53%), Postives = 75/167 (44.91%), Query Frame = 1
Query:    4 LAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            LA+ + +    +ISG HLNP++T   A   H                       LK V H        V  ++  +   +E +ITF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAVAAGN+   W+Y V P +G      VY
Sbjct:   65 LALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVY 231          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 4.925e-17
Identity = 56/174 (32.18%), Postives = 81/174 (46.55%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVP--SVNTG----QAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            G A+ + +    +ISG H+NP++T   A                         F LK     +++GG+ VP  SV  G    +   +E +ITF L++              G +A +A+G  V  NIL AGP SG SMNP R+ GPAVAAG++   W+Y V P +G      +Y
Sbjct:   64 GFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK-----YVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIY 232          
The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
NIP31_ARATH4.902e-3342.70Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]
NIP12_ORYSJ9.245e-3241.11Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
NIP1_NICAL2.060e-3141.21Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
NIP71_ARATH4.019e-2736.99Probable aquaporin NIP7-1 OS=Arabidopsis thaliana ... [more]
NIP21_ARATH8.381e-2536.31Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1... [more]
NIP41_ORYSJ1.172e-1835.06Aquaporin NIP4-1 OS=Oryza sativa subsp. japonica G... [more]
AQP_ANOGA7.598e-1832.26Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP43_ORYSJ1.693e-1734.30Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP21_ORYSJ3.771e-1733.53Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH4.925e-1732.18Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]

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Properties
Property NameValue
Genbank descriptionC07001C05SK NTLeaf1 Citrus clementina cDNA clone C07001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bp
GGGCTGGCCGTTATGATCGTGATTCTGTCAACAGGCCATATTTCTGGAGC
ACATCTTAATCCGTCGCTCACCATCGCATTTGCAGCACTTCGTCACTTTC
CGTGGGTTCAAGTGCCGGCCTATGTTGCAGCGCAGGTTTCAGCATCCGTT
TGTGCTTCTTTTGCTCTCAAGGGTGTTTTTCATCCTTTCATGTCTGGTGG
CGTTACTGTTCCTTCCGTAAACACTGGCCAGGCTTTTGCTCTCGAATTCC
TCATCACATTCAATCTCCTTTTTGTTGTCACTGCTGTTGCTACCGACACC
CGCGCGGTGGGAGAGTTGGCGGGCATTGCAGTTGGAGCTACAGTCATGCT
CAATATTCTAGTGGCGGGGCCATCAAGTGGTGCTTCCATGAATCCAGTAA
GAACTTTGGGACCAGCCGTTGCAGCAGGAAATTACAAGTCATTGTGGATA
TACTTAGTGGCTCCAACTCTGGGGGCTCTTGCAGGGGCAGCTGTTTATAC
GCTCGTCAAACTTCGAGGGGATGATAGTACTGAGACACCACGCCAGGTTA
GG
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