CX299695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.925e-17 Identity = 57/175 (32.57%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVN----TGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 GL++ ++ GHISG H+NP++T+A R L V P + GG+ V +V+ G +E +ITF L+F G +A +A+G +V + L A +GASMNP R+ GPAV GN+++ WIY V P +GA+ A+Y V Sbjct: 78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYV 251
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.925e-17 Identity = 57/175 (32.57%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVN----TGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 GL++ ++ GHISG H+NP++T+A R L V P + GG+ V +V+ G +E +ITF L+F G +A +A+G +V + L A +GASMNP R+ GPAV GN+++ WIY V P +GA+ A+Y V Sbjct: 81 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYV 254
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.432e-17 Identity = 57/181 (31.49%), Postives = 81/181 (44.75%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS-----VNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGD 522 G + + + +ISG H+NP++T A A+ G GV P+ V + +E ++TF L++ G +A IA+G V NILVAGP SG SMNP R+ GPAVA+G+Y ++WIY V P +G VY V + GD Sbjct: 65 GFGLFVAVAIGANISGGHVNPAVTFGLAL------GGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGD 239
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 6.432e-17 Identity = 57/175 (32.57%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVN----TGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 GL++ ++ GHISG H+NP++T+A R L V P + GG+ V +V+ G +E +ITF L+F G +A +A+G +V + L A +GASMNP R+ GPAV GN+ + WIY V P +GA+ A+Y V Sbjct: 78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYV 251
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 6.432e-17 Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVN----TGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 GL++ ++ GHISG H+NP++T+A R L V P + GG+ V +V+ G +E +ITF L+F G +A +A+G +V + L A +GASMNP R+ GPAV GN+++ WIY V P +GA+ +Y V Sbjct: 78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYV 251
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.097e-16 Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVN----TGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 GL++ ++ GHISG H+NP++T+A R L V P + GG+ V +V+ G +E +ITF L+F G +A +A+G +V + L A +GASMNP R+ GPAV GN+++ WIY V P +GA+ +Y V Sbjct: 78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYV 251
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.433e-16 Identity = 54/166 (32.53%), Postives = 75/166 (45.18%), Query Frame = 1 Query: 7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498 A+ + + +ISG HLNP++T A H F L+ V H V ++ + +E +ITF L++ G +A +A+G V NIL AGP SG SMNP R+ GPAVAAGN+ W+Y V P +G VY Sbjct: 66 ALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVGGGLAGLVY 231
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.871e-16 Identity = 56/175 (32.00%), Postives = 83/175 (47.43%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVN----TGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 GL++ ++ GHISG H+NP++T+A R L V P + GG+ V V+ G +E +ITF L+F G +A +A+G +V + L A +GASMNP R+ GPAV GN+++ WIY V P +GA+ +Y V Sbjct: 78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYV 251
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.192e-16 Identity = 60/186 (32.26%), Postives = 83/186 (44.62%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTV----PSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGE-LAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV-KLR-GDDSTET 537 GL V + GH+SG H+NP++T+ F + +K G + V PS+N QA +E LITF L+F + A +AVG + L A SGASMNP R+ GPAV G + W+Y V P G L +Y L+ K+R GDD T++ Sbjct: 57 GLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDLGVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGRQDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQGVWTYHWVYWVGPIAGGLLAGIIYRLIFKVRKGDDETDS 242
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-15 Identity = 55/172 (31.98%), Postives = 77/172 (44.77%), Query Frame = 1 Query: 10 VMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVP------SVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAG---IAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498 V+ V++S GHISG HLNP++T+ H F L +++GG+ P V+ Q E ++TF+LLF G L G + G V NIL G SGASMNP R+ GPA+ +GN+ W+Y V P +G +Y Sbjct: 63 VVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLS-----YLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKK-GSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIY 228 The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bpback to top |