CX299695

Overview
NameCX299695
Unique NameCX299695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.213e-15
Identity = 56/174 (32.18%), Postives = 76/174 (43.68%), Query Frame = 1
Query:    4 LAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRG 519
            LA+ + +    +ISG HLNP++T   A   H                       L  V H        V  ++  +    E +ITF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAVAAG++   W+Y V P +G      VY  V + G
Sbjct:   65 LALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVGGGLAGLVYGDVFIGG 238          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.584e-15
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 1
Query:    7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS------VNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTL-GALAG 486
            A+ + +    ++SG HLNP++T+  A   +                       LK     F++ G++VP+      ++  Q   +E +ITF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAVA+G++   WIY   P + GALAG
Sbjct:   66 ALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK-----FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAG 229          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-15
Identity = 53/172 (30.81%), Postives = 78/172 (45.35%), Query Frame = 1
Query:    7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS------VNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            A+ + +    +ISG HLNP++T+  A   +                       LK     +++ G+ VP+      +N  Q   +E +ITF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAV AG++   WIY   P +G      +Y
Sbjct:   66 ALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK-----YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.529e-15
Identity = 57/190 (30.00%), Postives = 89/190 (46.84%), Query Frame = 1
Query:    7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS--VNTG----QAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRGDDSTETPRQVR 552
            A+ + +    +ISG HLNP++T+  A   +                       L      F++ G +VP+  V+ G    +   +E ++TF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAV +G+   +WIY V P +G      +Y  V +   ++ ET R++R
Sbjct:   66 ALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLV-----FVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDVFIGSYEAVET-REIR 249          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.610e-15
Identity = 53/172 (30.81%), Postives = 78/172 (45.35%), Query Frame = 1
Query:    7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS------VNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            A+ + +    +ISG HLNP++T+  A   +                       LK     +++ G+ VP+      +N  Q   +E +ITF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAV AG++   WIY   P +G      +Y
Sbjct:   66 ALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK-----YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.020e-15
Identity = 53/172 (30.81%), Postives = 79/172 (45.93%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTV----PSVNTGQAFALEFLIT--FNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            GLA+  ++ S GHISGAH+NP++T AF                            L  V  P + G + +    P+V+ GQA  +E  +T  F L              G +A +AVG ++ L  L     +GA MNP R+  PA+  GN+ + W+Y V P +G   G+ +Y
Sbjct:   49 GLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA-LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGNFTNHWVYWVGPIIGGGLGSLLY 219          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.020e-15
Identity = 56/181 (30.94%), Postives = 80/181 (44.20%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTV----PSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGE-LAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTL-VKLRGDD 525
            GL V  +  + GH+SG H+NP++TI                              +K      + GG+ V    P +  GQ   +E LITF L+F             +  A +A+G ++    L A   +GASMNP R+ GPAV  GN+   W+Y V P +G +   AVY L  K+R  D
Sbjct:   63 GLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVYRLFFKVRKGD 243          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.341e-14
Identity = 53/169 (31.36%), Postives = 76/169 (44.97%), Query Frame = 1
Query:   10 VMIVILSTG-HISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTG----QAFALEFLITFNLLFXXXXXXXXXXXX-GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            V+ V++S G H+SG H+NP++T+  AA                          L   F      GV V ++  G    +   +E ++TF+LLF             G +  + VG  V  N+L  GP SGASMNP R+ GPA+ AG +   W+Y V P +G      VY
Sbjct:   66 VVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLL--AFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRAVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVY 232          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.288e-14
Identity = 50/172 (29.07%), Postives = 77/172 (44.77%), Query Frame = 1
Query:    7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTG------QAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            A+ + +    +ISG HLNP++T+  A   +                       L      F++ G +VP+          +   +E ++TF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAV +G++  +WIY V P +G      +Y
Sbjct:   66 ALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLV-----FVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIY 232          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.988e-14
Identity = 57/180 (31.67%), Postives = 79/180 (43.89%), Query Frame = 1
Query:    4 LAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS--VNTG----QAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKLRG 519
            LA+ + +    + SG HLNP++T   A   H                       L+ V H     G  +P+  V+ G    +    E +ITF L++              G +A IA+G  V  NIL AGP SG SMNP R+ GPAVAA ++   W+Y V P +G      VY  V + G
Sbjct:   65 LALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTH-----GKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAGLVYGDVFIGG 239          
The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
TIP21_MAIZE1.213e-1532.18Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP_ANTMA1.584e-1532.54Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP2_TOBAC3.529e-1530.81Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP23_ARATH3.529e-1530.00Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP1_TOBAC4.610e-1530.81Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
MIP_HUMAN6.020e-1530.81Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQP_AEDAE6.020e-1530.94Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP44_MAIZE1.341e-1431.36Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP22_ARATH2.288e-1429.07Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP22_MAIZE2.988e-1431.67Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC07001C05SK NTLeaf1 Citrus clementina cDNA clone C07001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bp
GGGCTGGCCGTTATGATCGTGATTCTGTCAACAGGCCATATTTCTGGAGC
ACATCTTAATCCGTCGCTCACCATCGCATTTGCAGCACTTCGTCACTTTC
CGTGGGTTCAAGTGCCGGCCTATGTTGCAGCGCAGGTTTCAGCATCCGTT
TGTGCTTCTTTTGCTCTCAAGGGTGTTTTTCATCCTTTCATGTCTGGTGG
CGTTACTGTTCCTTCCGTAAACACTGGCCAGGCTTTTGCTCTCGAATTCC
TCATCACATTCAATCTCCTTTTTGTTGTCACTGCTGTTGCTACCGACACC
CGCGCGGTGGGAGAGTTGGCGGGCATTGCAGTTGGAGCTACAGTCATGCT
CAATATTCTAGTGGCGGGGCCATCAAGTGGTGCTTCCATGAATCCAGTAA
GAACTTTGGGACCAGCCGTTGCAGCAGGAAATTACAAGTCATTGTGGATA
TACTTAGTGGCTCCAACTCTGGGGGCTCTTGCAGGGGCAGCTGTTTATAC
GCTCGTCAAACTTCGAGGGGATGATAGTACTGAGACACCACGCCAGGTTA
GG
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