CX299695

Overview
NameCX299695
Unique NameCX299695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.314e-13
Identity = 52/174 (29.89%), Postives = 75/174 (43.10%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTV----PSVNTGQAFALEFLIT--FNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTL 504
            GLA   ++ + GH+SG H+NP++T+AF                            L GV    + G + +    PSV  GQ   +E L+T  F L              G  A + VG ++ L  L   P +GA MNP R+  PAV   N+ + W++   P LGA   A +Y L
Sbjct:   49 GLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGRPGS-AALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRNFTNHWVFWAGPLLGAALAALLYEL 221          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.635e-13
Identity = 58/187 (31.02%), Postives = 85/187 (45.45%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSG---GVT--VPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGE-LAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV-KLR-GDDSTET 537
            GL V  +  + GHISG H+NP++T+ F  +                         +K      +SG   GV+    ++  GQA  +E LITF L+              +  A +AVG ++    L A   +GASMNP R+ GPAV    +   W+Y V P +GA+  A +Y  V K+R GDD   +
Sbjct:   62 GLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGRTDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNMWIDHWVYWVGPIVGAIVAALLYKFVFKVRKGDDEANS 248          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 9.612e-13
Identity = 50/172 (29.07%), Postives = 77/172 (44.77%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS----VNTGQAFALEFLIT--FNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            GLA+  ++ + GHISGAH+NP++T AF                            L  V  P + G + + +    V+ GQA  +E  +T  F L              G +A +AVG ++ L  L     +GA MNP R+  PA+   N+ + W+Y V P +G   G+ +Y
Sbjct:   47 GLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLY 217          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 9.612e-13
Identity = 50/172 (29.07%), Postives = 77/172 (44.77%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS----VNTGQAFALEFLIT--FNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            GLA+  ++ + GHISGAH+NP++T AF                            L  V  P + G + + +    V+ GQA  +E  +T  F L              G +A +AVG ++ L  L     +GA MNP R+  PA+   N+ + W+Y V P +G   G+ +Y
Sbjct:   49 GLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLY 219          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.612e-13
Identity = 47/176 (26.70%), Postives = 77/176 (43.75%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTV----PSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAG---IAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507
            G+++  +  S GH+SGAHLNP++T+                              L G+     +  + +    P V+ GQ   +E L+TF L+              +++G   +A+G +V L  L+A   +G  MNP R+ G AV   N+   WI+ V P +G  A A +Y  +
Sbjct:   61 GISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRH--DVSGSVPLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKNFTYHWIFWVGPMIGGAAAAIIYDFI 234          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.255e-12
Identity = 49/176 (27.84%), Postives = 78/176 (44.32%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTV----PSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAG---IAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507
            GL +  ++ + GHISGAH+NP++T+A     H                       L  +    + G + V     S   GQA  +E  +T  L+             GE  G   +++G +V L  L+    +G SMNP R+L PAV  G +   W++ + P +GA+ G+ +Y  V
Sbjct:   49 GLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVL--CIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYV 222          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.639e-12
Identity = 46/173 (26.59%), Postives = 81/173 (46.82%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNT----GQAFALEFLITFNLLFXXXXXXXXXXXXGELAG---IAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            GL + I++ + GH+SGAH+NP++T+A     H  +                    L  +    + G + V +++     GQA  +E  +T  L+             G+  G   +++G +V L  L+    +G SMNP R+L PAV  G +   W++ + P +GA+ G+ +Y
Sbjct:   49 GLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERR--GDNLGSPALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAIIGSLLY 219          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.141e-12
Identity = 52/175 (29.71%), Postives = 76/175 (43.43%), Query Frame = 1
Query:    1 GLAVMIVILSTG--HISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVP------SVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAG-IAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            G A+++ +++T   HISG H+NP++T++ A   H                     F L+     +++GG+  P       V   Q    E + TF+LLF               AG +  G  V  N +     SGASMNP R+ GPAVA+G +   W+Y V P  G      VY
Sbjct:   61 GQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLR-----WLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVY 230          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.797e-12
Identity = 45/169 (26.63%), Postives = 75/169 (44.38%), Query Frame = 1
Query:    7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507
            A+ + +    +ISG H+NP++T       +                     F L+       +G   +  V+  +A  LE ++TF L++              G +A IA+G  V  NILV G   GASMNP  + GPA+ + +++S W+Y V P +G      +Y ++
Sbjct:   68 ALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 3.652e-12
Identity = 51/185 (27.57%), Postives = 79/185 (42.70%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFH--PFMSGGVTV--PSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL-RGDDSTE 534
            GL++  +  S GHISGAHLNP++T+                              L G+    P  S G+    P VN+GQ   +E + T  L+               G+   +A+G +V L  L+A   +G  +NP R+ G +V   N++  WI+ V P +GA     +Y  +   R  D T+
Sbjct:   59 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRRDLGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSDLTD 243          
The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
MIP_CHICK4.314e-1329.89Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_HAEIX5.635e-1331.02Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
MIP_RAT9.612e-1329.07Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE9.612e-1329.07Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQPA_RANES9.612e-1326.70Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP2_HUMAN1.255e-1227.84Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP2_RAT1.639e-1226.59Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP43_MAIZE2.141e-1229.71Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP11_ORYSJ2.797e-1226.63Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQP1_SHEEP3.652e-1227.57Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC07001C05SK NTLeaf1 Citrus clementina cDNA clone C07001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bp
GGGCTGGCCGTTATGATCGTGATTCTGTCAACAGGCCATATTTCTGGAGC
ACATCTTAATCCGTCGCTCACCATCGCATTTGCAGCACTTCGTCACTTTC
CGTGGGTTCAAGTGCCGGCCTATGTTGCAGCGCAGGTTTCAGCATCCGTT
TGTGCTTCTTTTGCTCTCAAGGGTGTTTTTCATCCTTTCATGTCTGGTGG
CGTTACTGTTCCTTCCGTAAACACTGGCCAGGCTTTTGCTCTCGAATTCC
TCATCACATTCAATCTCCTTTTTGTTGTCACTGCTGTTGCTACCGACACC
CGCGCGGTGGGAGAGTTGGCGGGCATTGCAGTTGGAGCTACAGTCATGCT
CAATATTCTAGTGGCGGGGCCATCAAGTGGTGCTTCCATGAATCCAGTAA
GAACTTTGGGACCAGCCGTTGCAGCAGGAAATTACAAGTCATTGTGGATA
TACTTAGTGGCTCCAACTCTGGGGGCTCTTGCAGGGGCAGCTGTTTATAC
GCTCGTCAAACTTCGAGGGGATGATAGTACTGAGACACCACGCCAGGTTA
GG
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