CX299695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11 Identity = 51/184 (27.72%), Postives = 78/184 (42.39%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFH--PFMSGGVT--VPSVNTGQAFALEFLITFNL-LFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL-RGDDSTE 534 GL++ + S GHISGAHLNP++T+ L G+ P S G+ P V++GQ +E + T L L G A +A+G +V L L+A +G +NP R+ G AV N++ W++ V P +G +Y + R D T+ Sbjct: 59 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRSSDLTD 242
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.092e-11 Identity = 47/172 (27.33%), Postives = 71/172 (41.28%), Query Frame = 1 Query: 4 LAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGV----FHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 LA + + SGAH NP++T+A+ H L GV + V S +TGQA A+E ++T L+ A + +G +V L L+ +G SMNP R+ GPAV G + WI+ V P GA+ + +Y + Sbjct: 61 LATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLASPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNFI 231
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.038e-11 Identity = 45/169 (26.63%), Postives = 72/169 (42.60%), Query Frame = 1 Query: 7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507 A+ + + +ISG H+NP++T + F L+ +G + V+ +A LE ++TF L++ G +A IA+G V NILV G GASMNP + GPA+ + + W+Y V P +G +Y L+ Sbjct: 68 ALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELL 236
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.888e-11 Identity = 50/171 (29.24%), Postives = 72/171 (42.11%), Query Frame = 1 Query: 13 MIVILSTG-HISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS------VNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498 + V +S G +ISG H+NP++T + LK F +GG+ VP+ V AF E ++TF L++ G +A IA+G V NIL G SGASMNP GPAV + + + W+Y P +G +Y Sbjct: 69 LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK-----FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIY 234
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.996e-11 Identity = 55/180 (30.56%), Postives = 77/180 (42.78%), Query Frame = 1 Query: 1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFAL---KGVFHPFMSG-GVTVPSVNTG--QAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGP----AVAAGNYKSLW----IYLVAPTLGALAGAAVY 498 G A+ I + G+ISG H+NP++TI +++ FP F G+ + G G T P G QA E + TF L+ AGI +G TV I G +G+S+NP RT GP V AG +LW IY++ P +GA+ A Y Sbjct: 63 GFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGT--NLWNYFPIYVIGPVVGAVLAALTY 240 The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bpback to top |