CX299695

Overview
NameCX299695
Unique NameCX299695
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11
Identity = 51/184 (27.72%), Postives = 78/184 (42.39%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFH--PFMSGGVT--VPSVNTGQAFALEFLITFNL-LFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLVKL-RGDDSTE 534
            GL++  +  S GHISGAHLNP++T+                              L G+    P  S G+    P V++GQ   +E + T  L L             G  A +A+G +V L  L+A   +G  +NP R+ G AV   N++  W++ V P +G      +Y  +   R  D T+
Sbjct:   59 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRSSDLTD 242          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.092e-11
Identity = 47/172 (27.33%), Postives = 71/172 (41.28%), Query Frame = 1
Query:    4 LAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGV----FHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507
            LA    +  +   SGAH NP++T+A+    H                       L GV        +   V   S +TGQA A+E ++T  L+                A + +G +V L  L+    +G SMNP R+ GPAV  G +   WI+ V P  GA+  + +Y  +
Sbjct:   61 LATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLASPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNFI 231          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.038e-11
Identity = 45/169 (26.63%), Postives = 72/169 (42.60%), Query Frame = 1
Query:    7 AVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPSVNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVYTLV 507
            A+ + +    +ISG H+NP++T       +                     F L+       +G   +  V+  +A  LE ++TF L++              G +A IA+G  V  NILV G   GASMNP  + GPA+ +  +   W+Y V P +G      +Y L+
Sbjct:   68 ALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEWGYQWVYWVGPLIGGGLAGVIYELL 236          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.888e-11
Identity = 50/171 (29.24%), Postives = 72/171 (42.11%), Query Frame = 1
Query:   13 MIVILSTG-HISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFALKGVFHPFMSGGVTVPS------VNTGQAFALEFLITFNLLFXXXXXXXXXXXX--GELAGIAVGATVMLNILVAGPSSGASMNPVRTLGPAVAAGNYKSLWIYLVAPTLGALAGAAVY 498
            + V +S G +ISG H+NP++T       +                       LK     F +GG+ VP+      V    AF  E ++TF L++              G +A IA+G  V  NIL  G  SGASMNP    GPAV +  + + W+Y   P +G      +Y
Sbjct:   69 LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK-----FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLVGGGIAGLIY 234          
BLAST of CX299695 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.996e-11
Identity = 55/180 (30.56%), Postives = 77/180 (42.78%), Query Frame = 1
Query:    1 GLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWXXXXXXXXXXXXXXXXXXFAL---KGVFHPFMSG-GVTVPSVNTG--QAFALEFLITFNLLFXXXXXXXXXXXXGELAGIAVGATVMLNILVAGPSSGASMNPVRTLGP----AVAAGNYKSLW----IYLVAPTLGALAGAAVY 498
            G A+   I + G+ISG H+NP++TI   +++ FP                   F      G+    + G G T P    G  QA   E + TF L+                AGI +G TV   I   G  +G+S+NP RT GP     V AG   +LW    IY++ P +GA+  A  Y
Sbjct:   63 GFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGT--NLWNYFPIYVIGPVVGAVLAALTY 240          
The following BLAST results are available for this feature:
BLAST of CX299695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
AQP1_PIG1.813e-1127.72Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP6_MOUSE3.092e-1127.33Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
TIP11_MAIZE4.038e-1126.63Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP11_ARATH6.888e-1129.24Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
AQPM_METTH8.996e-1130.56Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]

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Properties
Property NameValue
Genbank descriptionC07001C05SK NTLeaf1 Citrus clementina cDNA clone C07001C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299695 ID=CX299695; Name=CX299695; organism=Citrus clementina; type=EST; length=552bp
GGGCTGGCCGTTATGATCGTGATTCTGTCAACAGGCCATATTTCTGGAGC
ACATCTTAATCCGTCGCTCACCATCGCATTTGCAGCACTTCGTCACTTTC
CGTGGGTTCAAGTGCCGGCCTATGTTGCAGCGCAGGTTTCAGCATCCGTT
TGTGCTTCTTTTGCTCTCAAGGGTGTTTTTCATCCTTTCATGTCTGGTGG
CGTTACTGTTCCTTCCGTAAACACTGGCCAGGCTTTTGCTCTCGAATTCC
TCATCACATTCAATCTCCTTTTTGTTGTCACTGCTGTTGCTACCGACACC
CGCGCGGTGGGAGAGTTGGCGGGCATTGCAGTTGGAGCTACAGTCATGCT
CAATATTCTAGTGGCGGGGCCATCAAGTGGTGCTTCCATGAATCCAGTAA
GAACTTTGGGACCAGCCGTTGCAGCAGGAAATTACAAGTCATTGTGGATA
TACTTAGTGGCTCCAACTCTGGGGGCTCTTGCAGGGGCAGCTGTTTATAC
GCTCGTCAAACTTCGAGGGGATGATAGTACTGAGACACCACGCCAGGTTA
GG
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