CX299758

Overview
NameCX299758
Unique NameCX299758
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length498
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299758 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.432e-11
Identity = 43/162 (26.54%), Postives = 73/162 (45.06%), Query Frame = 1
Query:   28 LAELMVLLGTPNISDIFPMLSWLDIQGIERRAKKISLWFENIINSTVEKYRSKDFN---VEGKERAGENFEGSRNKNFXXXXXXXXXNEDGSSSISMNQ--FKGVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKY 498
            L E   L G  N++D  P   W+D QGI +R  K     +  I+  ++++  K  N   V+  +    +        +           D  +SI + +   K ++              +EW + EL++ P+ +K+VQ+ELA+VVG+D  VEE  + KL Y
Sbjct:  208 LQEFSKLFGAFNVADFIPYFGWIDPQGINKRLVKARNDLDGFIDDIIDEHMKKKENQNAVDDGDVVDTDMVDDLLAFYSEEAKLVSETADLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTY 369          
BLAST of CX299758 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11
Identity = 42/164 (25.61%), Postives = 72/164 (43.90%), Query Frame = 1
Query:   13 ELKFKLAELMVLLGTPNISDIFPMLSWLDIQGIERRAKKISLWFENIINSTVEKYRS--KDFNVEGKERAGENFEGSRNKNFXXXXXXXXXNEDGSSSISMNQFKGVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKY 498
            E +  + ++  + G  N+SD   +   +D+QG  +R + +   F+ ++   + K     KD    GK+  GE   G   ++F         +E+    I     K ++               EW + EL++ P V++KV+EE+  VVG D  VEE   P L Y
Sbjct:  193 EARDVVRDVTEIFGEFNVSDFIWLFKKMDLQGFGKRIEDLFQRFDTLVERIISKREQTRKDRRRNGKK--GEQGSGDGIRDFLDILLDCTEDENSEIKIQRVHIKALIMDFFTAGTDTTAISTEWALVELVKKPSVLQKVREEIDNVVGKDRLVEESDCPNLPY 354          
BLAST of CX299758 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.285e-11
Identity = 45/168 (26.79%), Postives = 72/168 (42.86%), Query Frame = 1
Query:    7 GVELKFKLAELMVLLGTPNISDIFPMLSWLDIQGIERRAKKISLWFENIINSTVEKYRSKDFNVEGKERAGENFEGSRNKNFXXXXXXXXXNE----DGSSSISMNQFKGVLAXXXXXXXXXXXXMVEWTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKY 498
            G E    +  +M   G PNISDIFP L   D+QG+ ++ ++     + I    +E            ER  E  +G +N++           E    D    +S ++   ++              VEW + EL++HPQ M KV+ E+ QV+G +   EE  +  L Y
Sbjct:  166 GSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKMERDMGKGKEITKKFIE------------ERIEERKKGEKNRSIKDLLDVLIDFEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPY 321          
The following BLAST results are available for this feature:
BLAST of CX299758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
C84A1_ARATH1.432e-1126.54Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C93B1_GLYEC9.285e-1125.61Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C76A1_SOLME9.285e-1126.79Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionC07002B05SK NTLeaf1 Citrus clementina cDNA clone C07002B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299758 ID=CX299758; Name=CX299758; organism=Citrus clementina; type=EST; length=498bp
ATTCTTGGGGTTGAGCTAAAATTTAAGCTTGCAGAACTCATGGTGCTACT
GGGAACACCGAATATTTCGGATATCTTTCCAATGCTTTCATGGCTCGACA
TACAAGGTATAGAGAGGAGAGCAAAGAAGATTTCACTCTGGTTTGAAAAT
ATTATAAATTCTACTGTTGAAAAGTATAGAAGCAAGGACTTTAATGTTGA
AGGTAAAGAAAGAGCAGGGGAAAATTTTGAAGGATCAAGGAACAAGAACT
TCTTGCAGTTACTATTGGAGCTTCAAGAAAATGAAGACGGTTCTTCCTCA
ATTAGCATGAACCAATTTAAGGGCGTGCTCGCGGATATAATTACGGGTGG
AACCGACACCACAACTACNATGGTGGAATGGACAATGGCAGAGTTGATGC
AGCATCCACAAGTCATGAAGAAAGTTCAGGAAGAATTAGCTCAAGTTGTG
GGCATGGACAGTTGTGTTGAAGAATTTCATTTGCCTAAATTGAAATAT
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