CX299763

Overview
NameCX299763
Unique NameCX299763
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length353
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.626e-21
Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            KV+FDV I  +PAGR+ M LF   VPKTAENFRALCTGEKG+G+ G  LH+KGS FHRIIP FM+
Sbjct:   23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMI 87          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.185e-21
Identity = 47/65 (72.31%), Postives = 52/65 (80.00%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMI 69          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.055e-20
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 348
            +V+FD+ ++G P GRI M LF    P TAENFRALCTGEKG+GK GKPLH+KGS FHR+IP FM
Sbjct:    5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFM 68          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 1
Query:  145 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            ++TNKVYFDVEI G+ AGRIVMGLFG+ VPKT ENFRALCTGEK  G       YKGS+FHRII  FM+
Sbjct:   92 KVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMI 153          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 4.009e-20
Identity = 54/92 (58.70%), Postives = 64/92 (69.57%), Query Frame = 1
Query:   76 LWAIVLFATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            L A++LFA   S +A K  +    IT+KVYFD+E   KP GRIVMGL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+
Sbjct:   15 LGAMLLFA--QSAEAAKGPK----ITHKVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMI 93          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.236e-20
Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            +V+FD++I  +  GRI   LF   VPKTAENFRALCTGEKG+GK GKPLH+KGS FHR+I  FM+
Sbjct:    8 RVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMI 72          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.236e-20
Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 1
Query:   43 MASTKFLPLTM-LWAIVLFATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            MAS  FL L + L+  + F     + A K       ITNKVYFD+E  GKP GRIVMGL+GK VPKTAENFRAL TG+   G+      Y+GS+FHRII +FM+
Sbjct:   11 MASKSFLSLLVALFVAICFVLSPGVDAAKGPV----ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMI 109          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.839e-20
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 348
            KV+FD+ I    AGR+VM LF    P+TA NFRALCTGE GIGK+GK LHYKGS FHRIIP FM
Sbjct:    5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFM 68          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.931e-20
Identity = 52/99 (52.53%), Postives = 63/99 (63.64%), Query Frame = 1
Query:   55 KFLPLTMLWAIVLFATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            + L L +  A+ LF         K  +    IT+KVYFD+E  G+P GRIVMGL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+
Sbjct:    6 RILTLVVFAAVGLFLFMGQTVEAKGPK----ITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMI 93          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.931e-20
Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 348
            KV+FD+ + G+ +GR+   LF   VPKTAENFRALCTGEKG G SGKPLHYK S FHRIIP FM
Sbjct:    8 KVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFM 71          
The following BLAST results are available for this feature:
BLAST of CX299763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
CYP1_CAEEL3.626e-2169.23Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
PPID_RHIOR6.185e-2172.31Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
CP18D_ARATH1.055e-2067.19Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CP20C_ARATH3.070e-2069.57Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPIB_NEUCR4.009e-2058.70Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPID_EMENI5.236e-2064.62Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIB_CRYNE5.236e-2052.88Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
CP19C_ARATH6.839e-2068.75Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPIB_ARTBE8.931e-2052.53Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
CYP6_RHIOR8.931e-2068.75Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]

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Properties
Property NameValue
Genbank descriptionC07002B10SK NTLeaf1 Citrus clementina cDNA clone C07002B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299763 ID=CX299763; Name=CX299763; organism=Citrus clementina; type=EST; length=353bp
CCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTC
GACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCA
CTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATC
ACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACG
TATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATT
TCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCA
CTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCT
TCA
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