CX299763

Overview
NameCX299763
Unique NameCX299763
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length353
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.200e-18
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGL----FGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            +VYFD++I  + AGRI + L    F   VPKTAENFRALCTGEKG+GK  KPL YKGS FHR+I  FM+
Sbjct:    9 RVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMI 77          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.752e-18
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            +V+FD++I  +  GRI + L    VPKTAENFRALCTGEKG+GK GKPLH+KGS FHR+I  FM+
Sbjct:    9 RVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMI 71          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.401e-18
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 1
Query:   43 MASTKFLPLTMLWAIVLFATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            MA  K L   +L +I+ F         +S+ N  ++T+KV+FD+E+ GKP  RI++GLFGK VPKT ENF+ L  G +   K G+   YKGSTFHR+I SFM+
Sbjct:    1 MAVLKPLCPLLLLSIICFGLI------RSEANGPKVTDKVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQ--LKDGRTASYKGSTFHRVIKSFMI 95          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.862e-17
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            +V+F+V I GK  G+I   LF   VPKTAENFRALCTGEKG  ++G PLH+KGS+FHR+I  FM+
Sbjct:    5 RVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMV 69          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.432e-17
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  145 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            ++T+K++FD+EI G+ AGRIV+GLFG AVPKT ENF+ L TG KG G       Y+GS FHRIIP+FM+
Sbjct:   79 KVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMI 140          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.177e-17
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1
Query:  160 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            VYFD+E   KP GR+V+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMI 78          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.177e-17
Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 1
Query:  145 EITNKVYFDVEIA---GKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            +IT+KVYFD+ +    GK AGRIV+GL+G  VP+T ENFRALCTGEKG G       YKGSTFHR+I  FM+
Sbjct:   87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMI 151          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.419e-17
Identity = 41/64 (64.06%), Postives = 47/64 (73.44%), Query Frame = 1
Query:  160 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFM 348
            VYFD+   GKP GR+V  L+   VPKTA NFR+LCTG+KGI  KSGKPL YK S FHR+I  FM
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFM 69          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.419e-17
Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 1
Query:   67 LTMLWAIVLFATFSSIQAKKSDQNLK--EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            L  L+A  LF     +   ++ +  K  +IT+KVYFD+    +P GR+VMGL+GK VP+T ENFRAL TGEKG G       Y+GS FHR+I +FM+
Sbjct:    4 LRRLFASALFLGLGLLFLAQTAEAAKGPKITHKVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMI 93          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.419e-17
Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 1
Query:   43 MASTKFLPLTMLWAIVLFATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            M S K L L+    + L           S+    +ITNKVYFD++   +  GRIV+GL+GK VP+TAENFRAL TGEKG G       Y+GS FHR+I  FM+
Sbjct:    1 MTSLKSLFLSFFLVVALGLAL----VNASEPRGPKITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFG-------YEGSNFHRVIKDFMI 92          
The following BLAST results are available for this feature:
BLAST of CX299763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
PPID_ASPFU2.200e-1862.32Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPID_ASPOR3.752e-1863.08Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIB_SCHMA6.401e-1846.60Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPID_YARLI1.862e-1761.54Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
CYPB_VICFA2.432e-1759.42Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIB_ASPOR3.177e-1764.06Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CP20B_ARATH3.177e-1761.11Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPID_CANAL5.419e-1764.06Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
PPIB_GIBZE5.419e-1747.42Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIB_EMENI5.419e-1746.60Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]

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Properties
Property NameValue
Genbank descriptionC07002B10SK NTLeaf1 Citrus clementina cDNA clone C07002B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299763 ID=CX299763; Name=CX299763; organism=Citrus clementina; type=EST; length=353bp
CCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTC
GACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCA
CTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATC
ACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACG
TATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATT
TCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCA
CTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCT
TCA
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