CX299763

Overview
NameCX299763
Unique NameCX299763
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length353
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.022e-15
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  118 AKKSDQNLK--EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            A ++D+  K  ++T KV+FD+ +  + AGR+V+GLFGK VPKT ENF AL TGEKG G       +KGS FHR+I  FM+
Sbjct:   21 ASRADERKKGPKVTAKVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMI 93          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.335e-15
Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 348
            +V+FD+   G+P GRIVM L    VPKTAENFRALCTGEKG G       YKGS FHR+IP+FM
Sbjct:    5 RVFFDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSRFHRVIPNFM 61          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.743e-15
Identity = 41/65 (63.08%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            KV+FDV    KP GRIVM L    VP+TAENFRALCTGEKG G       YKG +FHR+IP FML
Sbjct:    5 KVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFML 62          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.277e-15
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 1
Query:  160 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 348
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFM 102          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.277e-15
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 1
Query:  160 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 348
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFM 102          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.973e-15
Identity = 41/68 (60.29%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  148 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            +T KVYFD+ I   PAGRI   LF   VPKTAENFRAL TGEKG G       Y GS+FHR+I  FML
Sbjct:    1 MTTKVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFML 61          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.883e-15
Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  157 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 348
            +V+FD++  G+  GRIVM L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP FM
Sbjct:    5 QVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFM 61          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.883e-15
Identity = 42/78 (53.85%), Postives = 50/78 (64.10%), Query Frame = 1
Query:  118 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            A+  D    ++T+KVYFD+EI GKP GRIV+GLFGK VPKTA NF  L    KG G       Y GS FHR+I  FM+
Sbjct:   17 AQGDDAKGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMI 87          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 5.072e-15
Identity = 38/69 (55.07%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  145 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            ++T KVYFD +I  +P GR+  GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMI 102          
BLAST of CX299763 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.651e-15
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 1
Query:  145 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFML 351
            ++T KVYFD++I  +  GR+V GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+
Sbjct:   41 KVTVKVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMI 102          
The following BLAST results are available for this feature:
BLAST of CX299763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
PPIB_CHICK1.022e-1551.25Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIA_BLAGE1.335e-1562.50Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIA1_RHIOR1.743e-1563.08Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIF_RAT2.277e-1563.49Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIF_MOUSE2.277e-1563.49Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_STRCH2.973e-1560.29Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPIA_HEMPU3.883e-1562.50Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
CYP5_CAEEL3.883e-1553.85Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIB_RAT5.072e-1555.07Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_MOUSE8.651e-1555.07Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionC07002B10SK NTLeaf1 Citrus clementina cDNA clone C07002B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299763 ID=CX299763; Name=CX299763; organism=Citrus clementina; type=EST; length=353bp
CCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTC
GACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCA
CTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATC
ACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACG
TATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATT
TCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCA
CTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCT
TCA
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