CX299766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 1.826e-33 Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 250 PS F+V+ GEKIVFKNNAGFPHNVVFDEDEIPSGVD SKISM LLNG GETY VTLTE G+Y FYC+PHQGAGMVG++TV Sbjct: 88 PSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.184e-32 Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 253 PS+ V++GE +VFKNNAGFPHNV+FDEDE+P GVD ISM EDLLN PGET++VTL EKGTYS YCSPHQGAGM G++TVN Sbjct: 83 PSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIYCSPHQGAGMAGKITVN 166
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_GINBI (Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.973e-31 Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 253 P+ V++GE+IVFKNNAGFPHNV+FDED +P+GVDVS ISMS EDLLN PGETY V L +KGTY F+C+PHQG GM G VTVN Sbjct: 16 PNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEEDLLNAPGETYVVKLDKKGTYRFFCAPHQGIGMSGIVTVN 99
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_PETCR (Plastocyanin A/B OS=Petroselinum crispum GN=PETE PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.108e-30 Identity = 61/84 (72.62%), Postives = 70/84 (83.33%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 253 PSSF+V++GEKI FKNNAGFPHN+VFDEDE+P+GV+ KIS + LNG GETY VTLTEKGTY FYC PH GAGM G+VTVN Sbjct: 16 PSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAGVNAEKISQ--PEYLNGAGETYEVTLTEKGTYKFYCEPHAGAGMKGEVTVN 97
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSJ (Plastocyanin, chloroplastic OS=Oryza sativa subsp. japonica GN=PETE PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.890e-30 Identity = 62/84 (73.81%), Postives = 69/84 (82.14%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 253 P+ F+V SGE I FKNNAGFPHNVVFDED +PSGVDVSKIS E+ LN PGET++VTLT GTY FYC PH GAGMVG+VTVN Sbjct: 73 PNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSI (Plastocyanin, chloroplastic OS=Oryza sativa subsp. indica GN=PETE PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.890e-30 Identity = 62/84 (73.81%), Postives = 69/84 (82.14%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 253 P+ F+V SGE I FKNNAGFPHNVVFDED +PSGVDVSKIS E+ LN PGET++VTLT GTY FYC PH GAGMVG+VTVN Sbjct: 73 PNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_DAUCA (Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.890e-30 Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 250 PSSFSV+ GE I FKNNAGFPHN+VFDEDE+P+GVDVSKIS ED L+G GE++ VTLTEKGTY FYC PH GAGM G+VTV Sbjct: 16 PSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAGVDVSKISQ--EDYLDGAGESFTVTLTEKGTYKFYCEPHAGAGMKGEVTV 96
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_HORVU (Plastocyanin, chloroplastic OS=Hordeum vulgare GN=PETE PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.089e-29 Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 253 P+ FSV +GE I FKNNAG+PHNVVFDED +PSGVDVSKIS E+ L PGET++VTLT GTY FYC PH GAGMVG+VTVN Sbjct: 74 PNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQ--EEYLTAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 155
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_CHLRE (Plastocyanin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETE PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.452e-24 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 250 P + ++ SGE + F NNAGFPHN+VFDED IPSGV+ IS +D LN PGETY+V LT G Y +YC PHQGAGMVG++ V Sbjct: 64 PKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISR--DDYLNAPGETYSVKLTAAGEYGYYCEPHQGAGMVGKIIV 144
BLAST of CX299766 vs. ExPASy Swiss-Prot
Match: PLAS_PHYPA (Plastocyanin, chloroplastic OS=Physcomitrella patens GN=PETE PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.510e-23 Identity = 48/84 (57.14%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 2 PSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 253 P SV++GE + F NN GFPHNVVFDED +P+GV I+ ED LNGP E++++T GTY FYC PHQGAGM G VTV+ Sbjct: 87 PKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAGVKTEDINH--EDYLNGPNESFSITFKTPGTYEFYCEPHQGAGMKGVVTVS 168 The following BLAST results are available for this feature:
BLAST of CX299766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299766 ID=CX299766; Name=CX299766; organism=Citrus clementina; type=EST; length=365bpback to top |