CX299805

Overview
NameCX299805
Unique NameCX299805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length537
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.645e-22
Identity = 64/174 (36.78%), Postives = 89/174 (51.15%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRT 530
            + +IK  VE  CPGVVSCADIL ++ RDGVVALGGP   +  GRRD   S        LP    S+  +L  ++   +DA  +VAL G+H++G+  C      +Y   D  +N      +   CP +     A      D  TP V  N+YY+N+L  KGL+  D +L  +  T
Sbjct:  107 VNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQTSD-LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYN--DTNINAAFATSLKANCPMSGGSSLAPL----DTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGST 273          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22
Identity = 58/174 (33.33%), Postives = 93/174 (53.45%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY------PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            I++IK A+E  CPGVVSCADIL ++    V   GGP + +  GRRDGR +        LP   DS+ ++  +F+   +D   LVAL G+H+ GR  C  + +RL+       + DP++ P+ +  +  +CP              D  +P   DN+Y++N+ +N+G++  D  L
Sbjct:  105 IDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQG---GDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQIL 275          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22
Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG  +        LP   + ++ +  +F A+G+    +V+L G+H+ GR  CV   +RL+        DP LN   +  +   CP    +         D  TP   DNNY+ N+  N GL+  D +L
Sbjct:  111 VDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQ---NGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQEL 280          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22
Identity = 63/181 (34.81%), Postives = 92/181 (50.83%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNPDH---VPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTR 533
            I++IK  +E  CP  VSCADIL ++ RD VV  GGP   ++ GR+D R +  +     LP  N ++S ++  F  +G+    +VAL G H++G+  C     RL P     PA + D+   +  +   C    P   +V   + D  TP   DN YY N+L  +GL+  D  LA  D  TR
Sbjct:  128 IDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGP---SVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTR 305          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22
Identity = 60/174 (34.48%), Postives = 94/174 (54.02%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            I+ +K AVE+ CP  VSCAD+L ++ ++ VV  GGP   +  GRRD  +   ++    LP    +++ + +RF  +G+D A  LVAL G H+ G+  C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L
Sbjct:  102 IDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQEL 272          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22
Identity = 62/170 (36.47%), Postives = 88/170 (51.76%), Query Frame = 3
Query:   42 CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP 536
            C   VSCADIL L+ RD VVA GGP   ++ GR DG  S A  +E  LP  +D++  +   F    +    ++AL  +H++G  HC K+  R++       VDP LN  +   +   CP  + DP+    +  D  TP   DN Y++N+   KGL   D  L TD R+RP
Sbjct:  119 CRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNV-DPRIA--INMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRP 285          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.761e-22
Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L
Sbjct:   89 VDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQEL 259          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.218e-22
Identity = 58/168 (34.52%), Postives = 88/168 (52.38%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            IE+ K  VE+ CPGVVSCADIL ++ RD   A+GGP   +K GRRD   +   + E  LP   D ++ ++  FA+ G+    +VAL G+H++G+  C     R+Y      ++         +CP    + +       D  TP   DNNY++N++  KGL+  D  L
Sbjct:  107 IEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSN-GTDIDAGFASTRRRQCPQ---EGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVL 270          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 6.218e-22
Identity = 59/180 (32.78%), Postives = 94/180 (52.22%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTR 533
            +E +K  +E  CPGVVSC+DI+ L+ RD +    GP   + TGRRDGR S   + +  +P+ +DS+ ++  +F   G++A  LV L  +H++G T C  +  RLY      + DP +NP  +P +  +CP    +      +  DR +  + D    +NI D   ++  D  L  D  TR
Sbjct:  101 VEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKD-MPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQ---NGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTR 276          
BLAST of CX299805 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.218e-22
Identity = 57/173 (32.95%), Postives = 88/173 (50.87%), Query Frame = 3
Query:    9 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 512
            ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +        +P  N++ + ++ RF   G+D   +VAL GSH++G + C     RLY +      D  L   +  ++  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L
Sbjct:  114 VDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDEVL 283          
The following BLAST results are available for this feature:
BLAST of CX299805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
PER42_MAIZE3.645e-2236.78Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER58_ARATH4.761e-2233.33Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER54_ARATH4.761e-2232.95Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER40_ARATH4.761e-2234.81Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER37_ARATH4.761e-2234.48Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER35_ARATH4.761e-2236.47Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER1C_ARMRU4.761e-2235.06Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PERX_NICSY6.218e-2234.52Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER43_ARATH6.218e-2232.78Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER15_ARATH6.218e-2232.95Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC07002F07SK NTLeaf1 Citrus clementina cDNA clone C07002F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299805 ID=CX299805; Name=CX299805; organism=Citrus clementina; type=EST; length=537bp
GCACGAGGATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGT
GTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGT
TGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTA
GAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGAC
AGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCC
TGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGTG
TGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCCT
GACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACCC
CAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTGG
ACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTGATGATGGTT
GATCATCAGCTAGCCACCGACAAGAGGACAAGACCTT
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