CX299816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.756e-58 Identity = 108/141 (76.60%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYRI +FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL H+ADPV NNAW +ATNFVPGK Sbjct: 127 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.756e-58 Identity = 111/141 (78.72%), Postives = 115/141 (81.56%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYRI +FDPLGLADDP F ELKVKELK GRLAM SMFGFFVQAIVTGKGP+ENL HIADPV NNAWAYATNFVPGK Sbjct: 125 FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.599e-58 Identity = 108/141 (76.60%), Postives = 116/141 (82.27%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMG +EGYR+ FDPLGLADDP FA++KVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL H+ADPV NNAWAYATNFVPGK Sbjct: 138 FGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.599e-58 Identity = 107/141 (75.89%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFK G+QIFS+GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL H+ADPV NNAWAYATNFVPGK Sbjct: 127 FGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.599e-58 Identity = 109/141 (77.30%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRI +FDPLGLADDP FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL H+ADPV NNAW+YATNFVPGK Sbjct: 129 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 4.701e-58 Identity = 107/141 (75.89%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLA+DP FAELKVK +KNGRLAMFSMFGFFVQAIVTGKGP+ENL H+ADPV NNAW+YATNFVPGK Sbjct: 127 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 4.701e-58 Identity = 107/141 (75.89%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAG+QIF EGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLADDP FAEL+VKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL H+ADPV NNAWA+ATNFVPGK Sbjct: 126 FGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 8.018e-58 Identity = 108/141 (76.60%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRI +FDPLGLADDP FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL H++DPV NNAW+YATNFVPGK Sbjct: 128 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 8.018e-58 Identity = 110/141 (78.01%), Postives = 116/141 (82.27%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPGK 427 FGEA WFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QV+LMG VEGYRI +FDPLGLADDP FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL H+A PV NNAWAYATNFVPGK Sbjct: 123 FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
BLAST of CX299816 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 6.788e-57 Identity = 107/140 (76.43%), Postives = 114/140 (81.43%), Query Frame = 2 Query: 5 FGEAFWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPXQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYXHIADPVANNAWAYATNFVPG 424 FGEA WFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ +FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL H+ADPVANNAWAYA PG Sbjct: 128 FGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267 The following BLAST results are available for this feature:
BLAST of CX299816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299816 ID=CX299816; Name=CX299816; organism=Citrus clementina; type=EST; length=570bpback to top |