CX299821
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA2_DAUCA (Proliferating cell nuclear antigen large form OS=Daucus carota PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 6.585e-40 Identity = 81/93 (87.10%), Postives = 89/93 (95.70%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDED 303 KFSTRGDIGTANIV RQNT+VDKPE+ATIIEM E VSLTFALRYMNSFT+ATPL+N VTISLSSELPVVVEYKIAEMGYIR+YLAPKIEE+++ Sbjct: 168 KFSTRGDIGTANIVCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYKIAEMGYIRYYLAPKIEEEDE 260
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_MAIZE (Proliferating cell nuclear antigen OS=Zea mays GN=PCNA PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.622e-38 Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEDETKP 315 KFST G+IG+ANIV RQN T+DKPEEATIIEM EPVSLTFALRYMNSFT+A+ LS VTISLSSELPVVVEYKIAEMGYIRFYLAPKIE+DE E KP Sbjct: 168 KFSTSGEIGSANIVCRQNQTIDKPEEATIIEMQEPVSLTFALRYMNSFTKASSLSEQVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDDE-EMKP 263
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_MACFA (Proliferating cell nuclear antigen OS=Macaca fascicularis GN=PCNA PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.797e-29 Identity = 59/92 (64.13%), Postives = 79/92 (85.87%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 300 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS+TVT+S+S+++P+VVEYKIA+MG++++YLAPKIE++E Sbjct: 168 KFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEE 259
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_HUMAN (Proliferating cell nuclear antigen OS=Homo sapiens GN=PCNA PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.797e-29 Identity = 59/92 (64.13%), Postives = 79/92 (85.87%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 300 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS+TVT+S+S+++P+VVEYKIA+MG++++YLAPKIE++E Sbjct: 168 KFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEE 259
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_BOVIN (Proliferating cell nuclear antigen OS=Bos taurus GN=PCNA PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.004e-29 Identity = 59/92 (64.13%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 300 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG++++YLAPKIE++E Sbjct: 168 KFSASGELGNGNIKLSQTSNVDKEEEAVAIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEE 259
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_RAT (Proliferating cell nuclear antigen OS=Rattus norvegicus GN=Pcna PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.230e-29 Identity = 59/92 (64.13%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 300 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG++++YLAPKIE++E Sbjct: 168 KFSASGELGNGNIKLSQTSNVDKEEEAVSIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEE 259
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_MOUSE (Proliferating cell nuclear antigen OS=Mus musculus GN=Pcna PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 5.230e-29 Identity = 59/92 (64.13%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 300 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG++++YLAPKIE++E Sbjct: 168 KFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVHLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEE 259
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_CHICK (Proliferating cell nuclear antigen OS=Gallus gallus GN=PCNA PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.830e-29 Identity = 58/93 (62.37%), Postives = 78/93 (83.87%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDED 303 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG++++YLAPKIE+ ++ Sbjct: 168 KFSANGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDQQE 260
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_CRIGR (Proliferating cell nuclear antigen OS=Cricetulus griseus GN=PCNA PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.921e-29 Identity = 58/92 (63.04%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDE 300 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS TVT+S+S+++P+VVEYKI++MG++++YLAPKIE++E Sbjct: 168 KFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSTDVPLVVEYKISDMGHLKYYLAPKIEDEE 259
BLAST of CX299821 vs. ExPASy Swiss-Prot
Match: PCNA_COTJA (Proliferating cell nuclear antigen OS=Coturnix coturnix japonica GN=PCNA PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.522e-28 Identity = 58/93 (62.37%), Postives = 77/93 (82.80%), Query Frame = 1 Query: 25 KFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDED 303 KFS G++G NI L Q + VDK EEA IEM+EPV LTFALRY+N FT+ATPLS TVT+S+S+++P+VVEYKIA+MG+ ++YLAPKIE+ ++ Sbjct: 168 KFSANGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHXKYYLAPKIEDQQE 260 The following BLAST results are available for this feature:
BLAST of CX299821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299821 ID=CX299821; Name=CX299821; organism=Citrus clementina; type=EST; length=537bpback to top |