CX299839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12 Identity = 35/104 (33.65%), Postives = 62/104 (59.62%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILG 314 P A+E LV+ G + AGF+ S ++ K L++G++M+FP+ ++HFQ+N G A + +FNS NPG+ +F + + ++E+ L A ++RL+ G Sbjct: 118 PRATETALVLAGRVYAGFVDSGGR-LFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGSGIREAVLERAFGLTPAELRRLEKRFG 220
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12 Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILG 314 P SEIL++V G + GF+SS+ N ++ K L GD+ +FP G++HFQVN G A+ F +S N G+ +F +N + +L+ + LD + VK L+ G Sbjct: 113 PRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKFG 220
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.265e-12 Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILG 314 P SEIL++V G + GF+SS+ N ++ K L GD+ +FP G++HFQVN G A+ F +S N G+ +F +N + +L+ + LD + VK L+ G Sbjct: 113 PRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKFG 220
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.570e-12 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLS 245 P A+EIL V+ G + GF++S+ N ++ K + KGD+ +FP+GL+HFQ N G A+ V+ +S NPG+ A+F + S Sbjct: 118 PRATEILTVLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPS 199
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.274e-12 Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 302 P A+EIL ++ G + GF++S+ N ++ K L KGD+ +FPQGL+HFQ N G + + +S NPG+ A+F + +S ++ + ++ V R++ Sbjct: 111 PRATEILTILEGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQ 213
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.501e-12 Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFAN--NLSSQLVEQTTFLDDATVKRLK 302 P A+EIL+VV G + GF++S+ N ++ K L GD+ +FP G++HFQVN G A+ F S NPG A+F + ++ +++ + LD VK L+ Sbjct: 115 PRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAFQLDVNVVKYLE 218
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.241e-11 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALF--ANNLSSQLVEQTTFLDDATVKRLK 302 P A+EI+ VV G + GF+++ AN ++ +T+ KG++ +FP+GL+HFQ N+G A + NS PG Q ALF A L S + + +D V+ +K Sbjct: 115 PRATEIIFVVEGSLDVGFVTT-ANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIK 215
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.621e-11 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLV 257 P A+E+ +V+ G GF++S+ N ++ K L KGD+ +FPQGL+HFQ+N G +G +S NPG+ A+F SQL+ Sbjct: 114 PRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFGPEHLSQLM 202
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.621e-11 Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGILG 314 P SEIL++V G + GF+SS+ N ++ K L GD+ +FP G++HFQ+N G A+ F +S N G+ +F +N + +L+ + LD VK L+ G Sbjct: 113 PRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKFG 220
BLAST of CX299839 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.117e-11 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 Query: 3 PAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN 239 P A+EIL+V G + GF++S+ N ++ K L +GD+ +FP+GL+HFQ N G A+ F + +S NPG+ +F N Sbjct: 116 PRATEILVVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGAN 195 The following BLAST results are available for this feature:
BLAST of CX299839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299839 ID=CX299839; Name=CX299839; organism=Citrus clementina; type=EST; length=431bpback to top |