CX299889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.118e-35 Identity = 74/164 (45.12%), Postives = 104/164 (63.41%), Query Frame = 1 Query: 70 STMAIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 +T +FGR D++ S +A LAEF ST +FVFAG GS +A K+ D+A L+A+A+ H FALF AV+ ++SGGHVNPAV+FG +GG+I+++ ++YWIAQLLGSIVA+ +L++VT + + TFGL+YTVY TA D Sbjct: 2 ATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAID 165
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.906e-33 Identity = 74/166 (44.58%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 79 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 A FGR D++ S +A LAEF+ST +FVFAG GS +A +K+ D A P GLV +A+ H ALF AV+ N+SGGHVNPAVTF +GG+I+++ I+YW+AQL+G+I+A LL++ T GL + TF LVY VY+TA D Sbjct: 8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAID 173
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.701e-33 Identity = 68/157 (43.31%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 91 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 GR +D+ + +A ++EF++T +FVFA GS ++ K+ D + P GLVA+++ H AL VAVA+ NISGGHVNPA+TFG LGG+++++ +FYW+AQLLG++VA+ LL++ TGG+ P TFGL+Y YAT D Sbjct: 15 GRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMST-PGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVID 170
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.484e-32 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 79 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 A FGR D++ S +A LAEF+ST +FVFA GS ++ +K+ + A P GL+ +A+ H FALF AV+ N+SGGHVNPAVTFG +GG++T + I+YWIAQLLG+I+A LL++ T G+ TFGLVY VY+T D Sbjct: 8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLID 173
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.256e-31 Identity = 68/157 (43.31%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 91 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 GR +D+ + +A ++EFI+T +FVFA GS ++ KM D + GLVA+A+ H AL VAVA+ NISGGHVNPAVTFG +GG+++++ + YW+AQLLG++ A+ LL++ TGG+ P TFGL+Y YAT D Sbjct: 14 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDMST-AGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVID 169
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.894e-30 Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1 Query: 91 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAAL--DPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 GR +D+ + +A ++EFI+T +FVFA GS ++ KM D + GLVA+A+ H L VAVA+ N+SGGHVNPAVTFG +GG+++++ + YW AQLLG++ A+ LL++ TGG P TFG VY YAT D Sbjct: 16 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVD 174
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 9.004e-30 Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 1 Query: 109 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVY 546 FS + +AY AEF ST LFVF VGS I+ +T D D S L+A A+ F LF AV I A++SGGHVNPAVTF A+GG IT+ + IFYW +Q+LGS A +L ++ G AVPT TF +VYTV+ Sbjct: 12 FSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH 157
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.836e-29 Identity = 68/160 (42.50%), Postives = 90/160 (56.25%), Query Frame = 1 Query: 82 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 I G ++ KA + EFI+T LFVFAGVGSA+A + + + + GL A+A+ H F + V ++ G +ISGGH+NPAVT GL LGG I++ YWI QLL S A FLL +TGG+ P H TF L++TVYAT D Sbjct: 4 IELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTLV---GLFAVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVD 159
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.877e-27 Identity = 68/147 (46.26%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 109 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSG-LVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVY 546 FS S ++YLAEFIST LFVF VGSAI+ +T +G LVA A+ F LF AV I A++SGGHVNPAVTF A+GG+I + + +FYW +QLLG+ A L + + G VPT TF LVYTV+ Sbjct: 14 FSAPSLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVH 160
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.589e-26 Identity = 64/148 (43.24%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 118 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 G+ +A L+EF++T +FVFA GS KM D GL+ +A+ H AL AVA+ N SGGHVNPAVTFG+ +G +I+ YW AQLLG+++A LL++ +GG+ TFGLVYTVYATA D Sbjct: 26 GATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTGT-LGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVD 172 The following BLAST results are available for this feature:
BLAST of CX299889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299889 ID=CX299889; Name=CX299889; organism=Citrus clementina; type=EST; length=561bpback to top |