CX299889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.113e-25 Identity = 67/161 (41.61%), Postives = 87/161 (54.04%), Query Frame = 1 Query: 82 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG-LAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 +A G ++ G +A +AE + T LFVF+GVGSA+A K+ GL A+A H + V V+ G ++SGGH+NPAVT GLA GG IT+ Y AQLLGS +A LL +TGG AVP H TF L++ VYAT D Sbjct: 4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTI-MGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVD 163
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.943e-24 Identity = 65/160 (40.62%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 85 AFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK-VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 A G ++ G +A LAE I T LFVFAGVGSA+A K+ GL A+A+ H + V V+ G ++SGGH+NPAVT GLA G+IT+ Y AQLLGS +A LL + VP H TF L++ VYAT D Sbjct: 5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVD 164
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.314e-24 Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 94 RFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 +F S+ + + Y++EFIST FV A VGS ++ K+ A P G++ AI + AL +V I N+SGGHVNPAVTF +A+ G+I++ T +FYW +Q++ S++A +LKV VP + F LVYTV+ TA+D Sbjct: 12 KFQGVLSMNALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASD 166
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.539e-21 Identity = 57/146 (39.04%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 F+ L E + T LFVF GVG+A+ + T + L A+A+ + V G +ISGGHVNPAVT LA+GG +T+ Y AQ+L S A FLL+ +TGGLA P H TF L++ +YAT D Sbjct: 18 FRGVLGELVLTFLFVFIGVGAAMT-DGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILD 162
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.640e-21 Identity = 63/169 (37.28%), Postives = 83/169 (49.11%), Query Frame = 1 Query: 76 MAIAFGRFDDSFS------LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 MA + DSF +G +A LAE + T LFVF GV +A+A A+ + L A+AI H A V V G ++SGGH+NPAVT GL + G IT L + Y AQLL S A LL+ ++GG+ P H TF L++ YA D Sbjct: 1 MAKLMNKLVDSFEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILD 169
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.223e-20 Identity = 58/149 (38.93%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 118 GSFKAYLAEFISTLLFVFAGVGSAIAFN-KMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 G +A LAE + T +FVF GV + +A A AA+ + L +AI A V V G ++SGGH+NPAVT L G IT Y AQLL S +A LL+ +TGG+A P H TF L++ VYAT D Sbjct: 17 GCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILD 165
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.468e-20 Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 115 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 +G +A LAE + T LFVF GV +++A A+ + L A+AI H A V V G ++SGGH+NPAVT G+ + G IT L + Y AQLL S +A LL+ ++GG+ P H TF L++ YA D Sbjct: 22 VGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILD 171
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.458e-19 Identity = 56/160 (35.00%), Postives = 77/160 (48.12%), Query Frame = 1 Query: 82 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAAD 561 + G +++ G +A E + T LFVF GV S I K A A + + + A A+ + V G ++SGGH+NPAVT LA+GG IT+ Y AQL GS +A LL+ +TGG A P H TF L+ + AT D Sbjct: 9 LELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGK-AAGGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILD 167
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.491e-16 Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 103 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 D+ LGS ++A +AEFI+TLLF++ V + I + T ADAA G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ I Y +AQ LG+I L+K Sbjct: 31 DAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVK 149
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.947e-16 Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 103 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS-----GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 D+ LG ++A +AEFI+TLLF++ + + I + T D AL+P G++ IA G +F+ V A ISGGH+NPAVTFGL L ++T++ + Y +AQ LG+I L+K Sbjct: 27 DATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQT-DPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVK 143 The following BLAST results are available for this feature:
BLAST of CX299889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299889 ID=CX299889; Name=CX299889; organism=Citrus clementina; type=EST; length=561bpback to top |