CX299889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.947e-16 Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 103 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMT--------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 D+ LGS ++A +AEFI+TLLF++ V + I + T ADAA G++ IA G +FV V A ISGGH+NPAVTFGL L +++++ + Y +AQ LG++ L+K Sbjct: 31 DAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVK 151
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.947e-16 Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 103 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 D+ LGS ++A +AEFI+TLLF++ V + I + T ADAA G++ IA G +FV V A ISGGH+NPAVTFGL L +++++ + Y +AQ LG+I L+K Sbjct: 31 DAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVK 149
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.322e-16 Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYAT 552 +KA AEF++TL+FV GVGS I + +D +V I++C G ++ V +ISGGH+NPAVT + +I+I +FY IAQ LG+I+ + +L +VT GGL V T TF LV+T++A+ Sbjct: 35 WKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVD---MVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFAS 177
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.400e-16 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKM------TADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEFI+TLLF++ V + I + T DAA G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ + Y IAQ LG+I L+K Sbjct: 40 YRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVK 148
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15 Identity = 53/146 (36.30%), Postives = 74/146 (50.68%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSI----VASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYA 549 ++A +AEFI+TLLF++ V + I K T D GL+ IA G +FV V A ISGGH+NPAVTFGL L +++++ + Y IAQ LG+I +K L + TF LVYTV++ Sbjct: 37 YRALIAEFIATLLFLYVTVATVIGHKKQTGPC--DGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFS 180
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS------GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEFI+TLLF++ V + I + T AA P G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ + Y IAQ LG+I L+K Sbjct: 41 YRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK 149
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15 Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFN-----KMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450 ++A +AEF++ +LFVF +GSA+ FN TA AA D V +++ G ++ +ISG H+NPAVT GL L QI+IL + Y IAQ +G+IVA+ +L +T L Sbjct: 11 WRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDN---VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSL 121
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEFI+TLLF++ V + I + T DAA G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ + Y IAQ LG+I L+K Sbjct: 40 YRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK 148
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15 Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG----LAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYA 549 ++A +AEFI+TLLF++ V + I + K T A GL+ IA G +FV V A ISGGH+NPAVTFGL L ++++L + Y IAQ G+I L+K G ++ TF LVYTV++ Sbjct: 39 WRAAIAEFIATLLFLYITVATVIGYKKETDPCA--SVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFS 182
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15 Identity = 51/152 (33.55%), Postives = 76/152 (50.00%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYA 549 ++A +AEF++TLLF++ V + I + T DAA G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ + Y AQ LG+I L+K G + TF LVYTV++ Sbjct: 40 YRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFS 191 The following BLAST results are available for this feature:
BLAST of CX299889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299889 ID=CX299889; Name=CX299889; organism=Citrus clementina; type=EST; length=561bpback to top |