CX299889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTA------DAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEF++TLLF++ V + I + T DAA G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ I Y +AQ LG++ L+K Sbjct: 35 YRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVK 143
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15 Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEF++TLLF++ V + I + + ADAA G++ IA G +F+ V A +SGGH+NPAVTFGL L +++++ + Y +AQ LG+I L+K Sbjct: 41 YRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVK 149
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15 Identity = 42/113 (37.17%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSG----LVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450 ++A +AEF++ +LFVF +G+A+ FN + A G +V +++ G ++ ++SG H+NPAVT G L QI+IL + Y IAQ LG++VA+ +L +T GL Sbjct: 11 WRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGL 123
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15 Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEFI+TLLF++ V + I + ++ G + IA G +F+ V A ISGGH+NPAVTFGL L +++++ + Y +AQ LG IV ++K Sbjct: 37 YRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVK 139
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15 Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPS------GLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEF++TLLF++ V + I + T AA P G++ IA G +F+ V A +SGGH+NPAVTFGL L +++++ + Y +AQ LG+I L+K Sbjct: 36 YRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVK 144
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMT------ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEF++TLLF++ V + I + T ADAA G++ IA G +F+ V A +SGGH+NPAVT GL L +++++ + Y AQ LG+I L+K Sbjct: 38 YRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVK 146
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15 Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGL---VAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLL 429 SL FKA AEF++TL+FVF G+GSA+ + PS L + I+I G A+ +SGGH+NPA+T L +G QI++L +FY AQL+G+I + +L Sbjct: 7 SLAFFKAVFAEFLATLIFVFFGLGSALKW----------PSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL 105
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14 Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFN-----KMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK 432 ++A +AEFI+TLLF++ V + I + K+ + D G++ IA G +F+ V A ISGGH+NPAVTFGL LG +++++ + Y IAQ G+I + L K Sbjct: 39 YRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAK 146
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14 Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGL---VAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLA 453 S+ FKA AEF++TL+FVF G+GSA+ + PS L + I+I G A+ +SGGH+NPA+T L +G QI++L IFY AQL+G+I + +L + G A Sbjct: 7 SVAFFKAVFAEFLATLIFVFFGLGSALKW----------PSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNA 113
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.396e-14 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMT----ADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKV 435 ++A +AEFI+TLLF++ V + I F T A GL+ I+ G +F+ V A ISGGH+NPAVTFGL L +++++ + Y +AQ LG+ L+KV Sbjct: 37 YRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKV 144 The following BLAST results are available for this feature:
BLAST of CX299889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299889 ID=CX299889; Name=CX299889; organism=Citrus clementina; type=EST; length=561bpback to top |