CX299889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.303e-14 Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYAT 552 +KA AEF++ L+FV +GS I + +D +V I++C G ++ V +ISGGH+NPAVT + +I+I +FY AQ LG+I+ + +L +VT GGL V T TF LV+T++A+ Sbjct: 35 WKAVTAEFLAMLIFVLLSLGSTINWGGKENPLPVD---MVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFAS 177
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 5.303e-14 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450 ++A +AEF++ LFVF +GSA+ FN V +++ G ++ +ISG H+NPAVT GL L QI+IL + Y IAQ +G+IVA+ +L +T L Sbjct: 11 WRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSL 119
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14 Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462 S ++A AEF +TL +VF G+G+++ + A P ++ +A+ G AL V +ISG HVNPAVTF +G Q+++L I Y +AQLLG++ + +L VT G LA+ T Sbjct: 6 SASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14 Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFN-----KMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450 ++A +AEF++ +LF+F +GSA+ F+ T A D V +++ G ++ +ISG H+NPAVT GL L QI++L I Y IAQ +G+IVA+ +L +T L Sbjct: 11 WRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDN---VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSL 121
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14 Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462 S ++A AEF T+ +VF G+G+++ + A P+ ++ IA+ G L V ++SG H+NPAVTF +G Q+++ IFY AQLLG++ + +L VT G LA+ T Sbjct: 6 SFSFWRAVFAEFFGTMFYVFFGLGASLKW-------AAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNT 120
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14 Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAV 456 S+ +A LAEF++TLLFVF G+GSA+ + A P ++ IA+ G + V ++SG H+NPAVT +G ++ L FY AQLLG++ + +L +T G LAV Sbjct: 6 SIAFSRAVLAEFLATLLFVFFGLGSALQW-------ASSPPSVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAV 118
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462 S ++A AEF +TL +VF G+G+++ + A P ++ +A+ G AL V +ISG HVNPAVTF +G Q+++L I Y AQLLG++ + +L VT G LA+ T Sbjct: 6 SASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNT 120
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13 Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGL---VAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHN 468 S+ KA AEF++TL+FVF G+GSA+ + PS L + IA+ G A+ +SGGH+NPA+T L +G QI++L FY AQL+G+I + +L V G LAV N Sbjct: 7 SVAFLKAVFAEFLATLIFVFFGLGSALKW----------PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP2_ORYAF (Aquaporin-2 (Fragment) OS=Orycteropus afer GN=AQP2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13 Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 441 S+ KA +EF++TLLFVF G+GSA+ + + PSGL IA+ G A+ V +ISG H+NPAVT +G ++ L IFY AQLLG++ + LL +T Sbjct: 1 SIAFSKAVFSEFLATLLFVFFGLGSALNWPQAL------PSGL-QIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRAIFYVAAQLLGAVAGAALLHELT 103
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462 S ++A AEF ++L +VF G+G+++ + A P ++ +A+ G AL V +ISG HVNPAVTF +G Q+++L I Y +AQLLG++ + +L VT G LA+ T Sbjct: 6 SASFWRAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 The following BLAST results are available for this feature:
BLAST of CX299889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299889 ID=CX299889; Name=CX299889; organism=Citrus clementina; type=EST; length=561bpback to top |