CX299889

Overview
NameCX299889
Unique NameCX299889
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length561
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLL 429
            S    KA  AEF++TL+FVF G+GSA+ +          PS ++ I++  G A+         +SGGH+NPA+T  L +G QI++L  +FY +AQL+G+I  + +L
Sbjct:    7 SAAFLKAVFAEFLATLIFVFFGLGSALKWPSAM------PS-VLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAIL 105          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 1
Query:  124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450
            ++A +AEF++  LFVF  +GSA+ F     +        V +++  G ++        +ISG H+NPAVT GL L  QI+I   + Y IAQ +G+IVA+ +L  +T  L
Sbjct:   11 WRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSL 119          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 1
Query:  124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYAT 552
            +KA  AEF++ L+FV   +GS I +        +D   +V I++C G ++   V    +ISGGH+NPAVT  +    +I+I   +FY  AQ LG+I+ + +L +VT     GGL V                     TF LV+T++A+
Sbjct:   35 WKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVD---MVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTM--VHGNLTAGHGLLVELIITFQLVFTIFAS 177          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHN 468
            S+   +A LAEF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V    ++SG H+NPAVT    +G  ++ L  +FY  AQLLG++  + LL  +T     G LAV   N
Sbjct:    6 SIAFSRAVLAEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALN 122          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHN 468
            S+   +A LAEF++TLLFVF G+GSA+ + +        PS ++ IA+  G A+   V    ++SG H+NPAVT    +G  ++ L  +FY  AQLLG++  + LL  +T     G LAV   N
Sbjct:    6 SIAFSRAVLAEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALN 122          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450
            ++A +AEF++T LF++  V + +  +K T+  A    G+  IA   G  +F  V   A ISGGH+NPAVTFGL L  ++++   IFY I Q LG+I  + ++K    GL
Sbjct:   57 YRAGIAEFVATFLFLYITVLTVMGVSKSTSKCAT--VGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGL 163          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 46/122 (37.70%), Postives = 68/122 (55.74%), Query Frame = 1
Query:  112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462
            S   ++A  AEF +TL +VF G+GS++ +       A  P  ++ +A+  G AL   V    +ISG HVNPAVTF   +G Q+++L    Y  AQLLG++  + +L  VT     G LA+ T
Sbjct:    4 SASFWRAIFAEFFATLFYVFFGLGSSLRW-------APGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNT 118          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 46/122 (37.70%), Postives = 68/122 (55.74%), Query Frame = 1
Query:  112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462
            S   ++A  AEF +TL +VF G+GS++ +       A  P  ++ +A+  G AL   V    +ISG HVNPAVTF   +G Q+++L    Y  AQLLG++  + +L  VT     G LA+ T
Sbjct:    6 SASFWRAIFAEFFATLFYVFFGLGSSLRW-------APGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 46/157 (29.30%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  103 DSFSLGS---FKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYA 549
            D+  LG    ++A +AEF++TL+F++  + + I +    A   A    G + +A   G  +FV V     +SGGH+NPAVT GL  G +++++  + Y +AQ LG+I  + ++K +       L    +                  TF LVYTV++
Sbjct:   33 DTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFS 189          
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 1
Query:  124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPT----HNXXXXXXXXXXXXXXXXXTFGLVYTVYA 549
            ++A +AEF++T LF++  + + +  NK  +  A    G+  IA   G  +F  V   A ISGGH+NPAVTFGL L  ++++   +FY   Q LG+I  + ++K    GL + +    +                  TF LVYTV++
Sbjct:   53 YRAGIAEFVATFLFLYISILTVMGVNKSASKCAT--VGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFS 196          
The following BLAST results are available for this feature:
BLAST of CX299889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
AQP5_SHEEP1.543e-1338.68Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP1_PONAB1.543e-1336.70Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP4_HUMAN2.015e-1333.11Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP2_SHEEP2.015e-1338.71Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_BOVIN2.015e-1338.71Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
PIP13_MAIZE2.632e-1339.45Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
MIP_RAT2.632e-1337.70Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_HUMAN2.632e-1337.70Lens fiber major intrinsic protein OS=Homo sapiens... [more]
PIP27_ORYSJ3.437e-1329.30Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP13_ORYSJ4.489e-1332.19Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]

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Properties
Property NameValue
Genbank descriptionC07003F06SK NTLeaf1 Citrus clementina cDNA clone C07003F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299889 ID=CX299889; Name=CX299889; organism=Citrus clementina; type=EST; length=561bp
TATCTTCTTCTTCTTCTTAAGAAAGACTCGAGAGAGTTTTTTTTCCCCTA
TTCTTTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTTCG
ATGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTATC
TCAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATTGCTTTCAA
CAAGATGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCATCG
CTATTTGCCATGGATTTGCTCTATTTGTCGCAGTTGCAATTGGTGCTAAC
ATCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTTGG
TGGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACTTC
TTGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGCTTG
GCAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATTGAAGGAGT
TGTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGCCA
CGGCAGCTGAC
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