CX299889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13 Identity = 49/146 (33.56%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPT----HNXXXXXXXXXXXXXXXXXTFGLVYTVYA 549 ++A +AEF++T LF++ V + + N T+ A G+ IA G +F V A ISGGH+NPAVTFGL L ++++ +FY + Q LG+I + ++K GL T + TF LVYTV++ Sbjct: 53 YRAGIAEFMATFLFLYITVLTVMGVNNSTSKCAT--VGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFS 196
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462 S ++A AEF +TL +VF G+G+++ + A P ++ +A+ G AL V +ISG HVNPAVTF +G Q+++L Y AQLLG++ + +L VT G LA+ T Sbjct: 6 SASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462 S ++A AEF +TL +VF G+G+++ + A P ++ +A+ G AL V +ISG HVNPAVTF +G Q+++L Y AQLLG++ + +L VT G LA+ T Sbjct: 6 SASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13 Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPT 462 S ++A AEF +TL +VF G+G+++ + P ++ +A+ G AL V +ISG HVNPAVTF +G Q+++L Y AQLLG++ + +L VT G LA+ T Sbjct: 6 SASFWRAIFAEFFATLFYVFFGLGASLRWTP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13 Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAA----LDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSI 411 ++A +AEF++TLLF++ V + I + + A G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ + Y +AQ LG+I Sbjct: 36 YRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAI 135
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13 Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450 ++A +AEF++T LF++ + + + +K ++ A G+ IA G +F V A ISGGH+NPAVTFGL L ++++ +FY + Q LG+I + ++K GL Sbjct: 53 YRAGIAEFVATFLFLYISILTVMGVSKSSSKCAT--VGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGL 159
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL 450 ++A +AEF++T LF++ + + + +K T+ A G+ IA G +F V A ISGGH+NPAVTFGL L ++++ +FY I Q LG++ + ++K GL Sbjct: 54 YRAGIAEFVATFLFLYITILTVMGVSKSTSKCAT--VGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGL 160
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13 Identity = 43/106 (40.57%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 441 ++ AE I TLL V G GS D +V IA+ GF + V ++SG H+NPAVT GL + G I+IL IFY I Q +G+I S +LKV+T Sbjct: 26 WRCLAAELIGTLLLVLIGTGSCTGVQISEGDV------VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVIT 125
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 112 SLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT 441 S+ +A L+EF++TLLFVF G+GSA+ + + PS ++ IA+ G A+ V +ISG H+NPAVT +G ++ L +FY AQLLG++ + LL +T Sbjct: 1 SIAFSRAVLSEFLATLLFVFFGLGSALNWPQAL------PS-VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALLHELT 103
BLAST of CX299889 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.000e-12 Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 124 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAA----LDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSI 411 ++A +AEF++TLLF++ V + I + + A G++ IA G +F+ V A ISGGH+NPAVTFGL L +++++ + Y +AQ LG+I Sbjct: 36 YRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAI 135 The following BLAST results are available for this feature:
BLAST of CX299889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299889 ID=CX299889; Name=CX299889; organism=Citrus clementina; type=EST; length=561bpback to top |