CX299895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 72 LAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI-YNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 371 L E++ TF LVYTV++ +RS +APL IG LA P G +NPAR+ G A++ +N W W++W+GP IGA +A ++F++ Sbjct: 152 LLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN----WRHHWVYWLGPLIGAGMAGALYEFVM 244
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 3 Query: 51 GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAA 350 GYS L EII T + + +T + VPV AP+ IG A+ ++HL +IP+T T +NPARS G A ++ A WLFW+ P +G AI A Sbjct: 126 GYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWLAPILGGAIGA 218
BLAST of CX299895 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11 Identity = 41/133 (30.83%), Postives = 62/133 (46.62%), Query Frame = 3 Query: 9 YYTRYGGGANELADGY-STGVG------------LAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 368 Y G +LA G+ S G G E++ T + ++ + +T K A APL IG A+ M+HL +IP+T T +NPARS G A ++ A WLFWV P +G + ++ + Sbjct: 101 YLIASGAAGFDLAKGFASNGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGSTHGKAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAIGQLWLFWVAPLLGGVLGGVIYRVL 226 The following BLAST results are available for this feature:
BLAST of CX299895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299895 ID=CX299895; Name=CX299895; organism=Citrus clementina; type=EST; length=543bpback to top |