CX299902

Overview
NameCX299902
Unique NameCX299902
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length474
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299902 vs. ExPASy Swiss-Prot
Match: MOB1_SCHPO (Maintenance of ploidy protein mob1 OS=Schizosaccharomyces pombe GN=mob1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.684e-12
Identity = 29/53 (54.72%), Postives = 42/53 (79.25%), Query Frame = 1
Query:    1 AHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSII 159
            AHIY SHF  +V+++ E++LNT FKHF+ F  EFGL+D KE  P+Q+L+DS++
Sbjct:  158 AHIYCSHFHVMVAMELESYLNTSFKHFVFFCREFGLMDNKEYAPMQDLVDSMV 210          
BLAST of CX299902 vs. ExPASy Swiss-Prot
Match: MOB1C_DICDI (Mps one binder kinase activator-like 1 homolog C OS=Dictyostelium discoideum GN=mobC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.652e-11
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 1
Query:    1 AHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQELIDSI 156
            AHIY+SH  ++  L  EAHLNT F+HF LF  EF L+DKKE+ PLQ +ID I
Sbjct:  159 AHIYYSHMDRVSVLGVEAHLNTAFRHFYLFIKEFNLVDKKEMLPLQNIIDKI 210          
BLAST of CX299902 vs. ExPASy Swiss-Prot
Match: MOL2A_BOVIN (Mps one binder kinase activator-like 2A OS=Bos taurus GN=MOBKL2A PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 1
Query:    4 HIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFGLIDKKELGPLQEL 144
            H+Y  HF +I  L  EAH+NTC+KHF  F  EFGLID KEL PL+E+
Sbjct:  165 HVYIHHFDRIAQLGSEAHVNTCYKHFYYFVTEFGLIDTKELEPLKEM 211          
The following BLAST results are available for this feature:
BLAST of CX299902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MOB1_SCHPO9.684e-1254.72Maintenance of ploidy protein mob1 OS=Schizosaccha... [more]
MOB1C_DICDI1.652e-1159.62Mps one binder kinase activator-like 1 homolog C O... [more]
MOL2A_BOVIN8.198e-1159.57Mps one binder kinase activator-like 2A OS=Bos tau... [more]

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Properties
Property NameValue
Genbank descriptionC07003G09SK NTLeaf1 Citrus clementina cDNA clone C07003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299902 ID=CX299902; Name=CX299902; organism=Citrus clementina; type=EST; length=474bp
GCCCATATTTATCACTCTCACTTCCAGAAAATCGTGAGCCTTAAGGAGGA
AGCTCATCTGAACACATGCTTCAAGCATTTCATACTCTTTACCTGTGAAT
TTGGTCTAATTGACAAGAAAGAGCTTGGACCACTTCAAGAGCTTATAGAT
TCCATTATAGTTCCATACTAAAATATGGGGTCGGCAGATTGCAAGAAAGG
ATTTTGCTTTTAGGGATATGTAATAAAAGCAAATAAGTTCTATCTGTATT
CTACTTCATTATCACCTTTGTGGCTCTCTATATCATAAATTGTTGTTCAT
GTTGATGATGTATGCTTGTATTTTTCTAACTTCATGCATGTATCAAGAAG
GCGGGGAAGCCCGTTTCATTGGGTAGCCTAGTCTTCGATGCTCTGTTTGC
GAAAATGGCAACAGGTTAAAAAAAAGAAAAAAAAAAAAAAGGTCCTATCT
GAGTTCTTGTGTATCTGATAGCGG
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