CX299906

Overview
NameCX299906
Unique NameCX299906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 9.320e-45
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  I KKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KD+DGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTFG 116          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 9.320e-45
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  I KKKYLVP+DL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_SCLS1 (Autophagy-related protein 8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg8 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 2.712e-44
Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  I KKKYLVP+DL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_CRYNE (Autophagy-related protein 8 OS=Cryptococcus neoformans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 2.712e-44
Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 1
Query:   34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            M +S FK EHP ++R AE+ RIR+KY DRIPVI EKAEK+D+P I KKKYLVPADL+VGQFVYV+RKRIKL+ EKAIF+FV + LPPT ALMS+IY+E+KDEDGFLY+ Y+ ENTFG
Sbjct:    1 MVRSKFKDEHPFDKRKAEAERIRQKYQDRIPVICEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLAPEKAIFIFVDDILPPTAALMSSIYDEHKDEDGFLYVLYASENTFG 117          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_BOTFB (Autophagy-related protein 8 OS=Botryotinia fuckeliana (strain B05.10) GN=atg8 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.542e-44
Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  I KKKYLVP+DL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY++YSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYNDRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTFG 116          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_VANPO (Autophagy-related protein 8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.041e-44
Identity = 83/115 (72.17%), Postives = 101/115 (87.83%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            KSSFK E+P E+R  ES RI EK+ +RIPVI EKAEK+D+P+I K+KYLVP+DL+VGQFVYV+RKRI L  EKAIF+FV +TLPPT ALMSA+Y+E+KD+DGFLY+TYSGENTFG
Sbjct:    2 KSSFKSEYPFEKRKTESERITEKFQNRIPVICEKAEKSDIPEIDKRKYLVPSDLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.041e-44
Identity = 82/116 (70.69%), Postives = 102/116 (87.93%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 387
            KSSFK E+P E+R AES RI EK+ +RIPVI EKAEK+D+P++ K+KYLVPADL+VGQFVYV+RKRI L  EKAIF+FV +TLPPT +LMS +Y+E+KD+DGFLY+TYSGENTFG+
Sbjct:    2 KSSFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFGY 117          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_YEAST (Autophagy-related protein 8 OS=Saccharomyces cerevisiae GN=ATG8 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44
Identity = 83/115 (72.17%), Postives = 102/115 (88.70%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            KS+FK E+P E+R AES RI +++ +RIPVI EKAEK+D+P+I K+KYLVPADL+VGQFVYV+RKRI L  EKAIF+FV +TLPPT ALMSAIY+E+KD+DGFLY+TYSGENTFG
Sbjct:    2 KSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_YEAS7 (Autophagy-related protein 8 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44
Identity = 83/115 (72.17%), Postives = 102/115 (88.70%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            KS+FK E+P E+R AES RI +++ +RIPVI EKAEK+D+P+I K+KYLVPADL+VGQFVYV+RKRI L  EKAIF+FV +TLPPT ALMSAIY+E+KD+DGFLY+TYSGENTFG
Sbjct:    2 KSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8_PICPA (Autophagy-related protein 8 OS=Pichia pastoris GN=ATG8 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.723e-43
Identity = 79/115 (68.70%), Postives = 98/115 (85.22%), Query Frame = 1
Query:   40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384
            +S FK EHP E+R AE+ RIR K+ DRIPVI EK EK+D+P++ K+KYLVP DL+VGQFVYV+RKRIK+ +EKAIF+F+ + LPPT ALMS +YEE+KDEDGFLY+ YSGENTFG
Sbjct:    2 RSQFKDEHPFEKRKAEAMRIRYKFADRIPVICEKVEKSDIPEVDKRKYLVPCDLTVGQFVYVIRKRIKIPSEKAIFIFIDDILPPTAALMSKVYEEHKDEDGFLYVLYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of CX299906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_COCIM9.320e-4574.78Autophagy-related protein 8 OS=Coccidioides immiti... [more]
ATG8_CHAGB9.320e-4574.78Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_SCLS12.712e-4473.91Autophagy-related protein 8 OS=Sclerotinia sclerot... [more]
ATG8_CRYNE2.712e-4471.79Autophagy-related protein 8 OS=Cryptococcus neofor... [more]
ATG8_BOTFB3.542e-4473.91Autophagy-related protein 8 OS=Botryotinia fuckeli... [more]
ATG8_VANPO6.041e-4472.17Autophagy-related protein 8 OS=Vanderwaltozyma pol... [more]
ATG8_CANGA6.041e-4470.69Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_YEAST7.890e-4472.17Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_YEAS77.890e-4472.17Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_PICPA8.723e-4368.70Autophagy-related protein 8 OS=Pichia pastoris GN=... [more]

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Properties
Property NameValue
Genbank descriptionC07003H02SK NTLeaf1 Citrus clementina cDNA clone C07003H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299906 ID=CX299906; Name=CX299906; organism=Citrus clementina; type=EST; length=491bp
ACCCCGGGCTGCAGGCGTAGCGTCAGTTTCGCCATGGCCAAAAGTTCATT
CAAGCTCGAGCATCCATTGGAGAGGAGGCTGGCAGAATCTGCTCGCATTA
GAGAGAAGTATCCTGACAGGATTCCGGTGATTGTGGAGAAGGCTGAGAAG
ACTGATGTTCCTGACATTCACAAGAAAAAATACCTTGTCCCAGCGGATTT
ATCTGTGGGACAATTTGTTTATGTTGTCCGTAAAAGGATTAAGCTCAGTG
CAGAAAAGGCCATATTTGTTTTTGTTAAGAATACTTTACCTCCAACCGGT
GCCTTGATGTCTGCTATATATGAGGAAAACAAGGATGAAGATGGTTTTCT
TTACATGACTTACAGTGGAGAGAATACCTTCGGTTGGTCATTTTAAGAGC
GAAGGCAACAAGCCATGTATCATAAAATTTGAAAGTTGTATATTCTCAGT
TGATCCCTTTTAAGCCATTCCCAGACATGTTCACTGATATC
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