CX299906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: GBRL1_BOVIN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Bos taurus GN=GABARAPL1 PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 2.544e-34 Identity = 66/115 (57.39%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 K +K +HP E R E +IR+KYPDR+PVIVEKA K VPD+ K+KYLVP+DL+VGQF +++RKRI L E A+F FV NT+PPT A M +YE+N +ED FLY+ YS E+ +G Sbjct: 2 KFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.323e-34 Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 1 Query: 46 SFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 SFK ++ L+ RLAES I KYP RIPVI EK KTD+P I KKK+LVP D+SVGQF+Y++ R+ LS KA+FVFV NTLP T ALM ++YE KD+DGF+YM YS E TFG Sbjct: 3 SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: GBRAP_RAT (Gamma-aminobutyric acid receptor-associated protein OS=Rattus norvegicus GN=Gabarap PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.667e-34 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+ KKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: GBRAP_RABIT (Gamma-aminobutyric acid receptor-associated protein OS=Oryctolagus cuniculus GN=GABARAP PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.667e-34 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+ KKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: GBRAP_MOUSE (Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus GN=Gabarap PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 9.667e-34 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+ KKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: GBRAP_HUMAN (Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens GN=GABARAP PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.667e-34 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+ KKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: GBRAP_BOVIN (Gamma-aminobutyric acid receptor-associated protein OS=Bos taurus GN=GABARAP PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 9.667e-34 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 K +K EHP E+R +E +IR+KYPDR+PVIVEKA K + D+ KKKYLVP+DL+VGQF +++RKRI L AE A+F FV N +PPT A M +Y+E+ +ED FLY+ YS E+ +G Sbjct: 2 KFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: GBRL3_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 3 OS=Homo sapiens GN=GABARAPL3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.182e-31 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1 Query: 40 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 K +K HP E R E +IR+KYPDR+P+IVEKA K VPD+ ++KYLVP+DL+ GQF ++RKRI L E A+F FV NT+PPT A M +YE++ +ED FLY+ YS E+ +G Sbjct: 2 KFQYKEVHPFEYRKKEGEKIRKKYPDRVPLIVEKAPKARVPDLDRRKYLVPSDLTDGQFYLLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDSHEEDDFLYVAYSNESVYG 116
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.911e-30 Identity = 64/122 (52.46%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 31 AMAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLS---AEKAIFVFV-KNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 A+ SFK E+ LE+R S++IR +Y DR+P+IVE+A +DVPDI+KKK+L P+++ + F+ +RK + S +KAIF+FV KN LPP+ L+S+IY+ +KDEDGFLY+ YSGENTFG Sbjct: 2 ALLSKSFKQEYSLEKRKLISSKIRNRYKDRLPIIVERAANSDVPDINKKKFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFG 123
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 3.802e-30 Identity = 64/118 (54.24%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDE-DGFLYMTYSGENTFG 384 M FK E LE R ESA + YPDRIPVIVEK ++++P++ K+KYLVP ++ VGQF++++R R+ LS A+FVFV NTLP T LM ++YE KDE DGFLY+ YS E TFG Sbjct: 1 MKPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118 The following BLAST results are available for this feature:
BLAST of CX299906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299906 ID=CX299906; Name=CX299906; organism=Citrus clementina; type=EST; length=491bpback to top |