CX299906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.074e-16 Identity = 44/116 (37.93%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 49 FKLEHPLERRLAESARIREKYPDRIPVIVE--KAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFV-KNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 387 FK R E +IR+++P +IPVI+E K EK +P + K K+LVP +++ + V ++R+R++L+ +A F+ V ++++ ++ IYE+ KDEDGFLYM Y+ + TFG+ Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEK-QLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.074e-16 Identity = 44/116 (37.93%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 49 FKLEHPLERRLAESARIREKYPDRIPVIVE--KAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFV-KNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGW 387 FK R E +IR+++P +IPVI+E K EK +P + K K+LVP +++ + V ++R+R++L+ +A F+ V ++++ ++ IYE+ KDEDGFLYM Y+ + TFG+ Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEK-QLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: LGG2_CAEEL (Protein lgg-2 OS=Caenorhabditis elegans GN=lgg-2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.239e-14 Identity = 37/115 (32.17%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 46 SFKLEHPLERRLAESARIREKYPDRIPVIVEKAE-KTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFV-KNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 SFK P R + IR + P+++PVI+E+ + + +P + + K+LVP ++V + + +VR+R++L ++A F+ V + ++ MS +Y + +D DGF+YM Y+ + FG Sbjct: 16 SFKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 130 The following BLAST results are available for this feature:
BLAST of CX299906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299906 ID=CX299906; Name=CX299906; organism=Citrus clementina; type=EST; length=491bpback to top |