CX299908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_YERPP (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis (strain Pestoides F) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 213 +MI QP+G +GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S ++VEYG++D V Sbjct: 133 VMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSV 202
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_YERPN (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 213 +MI QP+G +GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S ++VEYG++D V Sbjct: 133 VMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSV 202
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_YERPE (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 213 +MI QP+G +GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S ++VEYG++D V Sbjct: 133 VMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSV 202
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_YERPA (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 213 +MI QP+G +GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S ++VEYG++D V Sbjct: 133 VMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSV 202
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_YERP3 (ATP-dependent Clp protease proteolytic subunit OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13 Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 213 +MI QP+G +GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S ++VEYG++D V Sbjct: 133 VMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSV 202
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_PORGI (ATP-dependent Clp protease proteolytic subunit OS=Porphyromonas gingivalis GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.197e-13 Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 216 +MI QP+G ++GQA+D+EIA +E+ VK EL + + H GK EQ+E D R + + EA+EYG+IDK+L Sbjct: 147 VMIHQPLGGMQGQASDLEIAAREILRVKKELYTIISSHSGKPVEQVEKDSDRDYWMTAPEALEYGMIDKIL 217
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.093e-13 Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSD 258 IMI QP+G +GQA D+EI KE+ +K L L A+H G+ ++I D R + SP+EAVEYG+ID+V+ S D G+V+D Sbjct: 125 IMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV---DSSGDEGIVTD 206
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_DESPS (ATP-dependent Clp protease proteolytic subunit OS=Desulfotalea psychrophila GN=clpP PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.057e-12 Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPE 237 IMI QP+G +GQATD+EI KE+ ++ +L + A H GKT ++IE+D R + S EA +YG+ID+VL + E Sbjct: 120 IMIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEAQKYGLIDEVLVKREDVE 197
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_DESMR (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=clpP PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.057e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPE 237 IMI QP G +GQATD+EI KE + + L ++ AKH G++ E+I+ D R + S EAV YG+IDKVL + + E Sbjct: 120 IMIHQPSGGYQGQATDIEIHAKETRRTRETLNEIMAKHTGQSMERIQVDTERDNFMSAEEAVAYGLIDKVLTSRERLE 197
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMP (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.057e-12 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 228 IMI QP+G +GQA ++EI KE+ +K L L AKH ++ E+I D R + SP EAVEYG+IDKV+ +K Sbjct: 141 IMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAVEYGLIDKVIKNDK 215 The following BLAST results are available for this feature:
BLAST of CX299908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299908 ID=CX299908; Name=CX299908; organism=Citrus clementina; type=EST; length=378bpback to top |