CX299908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_SULNB (ATP-dependent Clp protease proteolytic subunit OS=Sulfurovum sp. (strain NBC37-1) GN=clpP PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.246e-12 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 216 IMI QP G +GQ+TD++I +E++ +K L ++ A+ GKT ++IE D R + S EAVEYG+IDKVL Sbjct: 120 IMIHQPSGGAQGQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEAVEYGLIDKVL 190
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.246e-12 Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 228 IMI QP+G ++GQATD++I +E+ ++ L +L KH G+ E+IE D R + S +EA EYGIID+V+ K Sbjct: 121 IMIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVITVRK 195
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP3_ANAVT (ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.246e-12 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 234 IMI QP+G +GQA D+EI +E+ +KA+L +L A H G+ E+IEAD R + S EA YG+ID+V+ + P Sbjct: 128 IMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVISRQNLP 204
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP2_ANASP (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.246e-12 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 234 IMI QP+G +GQA D+EI +E+ +KA+L +L A H G+ E+IEAD R + S EA YG+ID+V+ + P Sbjct: 146 IMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYGLIDQVISRQNLP 222
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_PSEPF (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas fluorescens (strain Pf0-1) GN=clpP PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.851e-12 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 216 +MI QP+G +GQA+D+EI KE+ ++ L L AKH G+T E+IE D R + S A EYG+ID+V+ Sbjct: 136 VMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAKEYGLIDEVI 206
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_STACT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus carnosus (strain TM300) GN=clpP PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12 Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 228 +MI QP+G +GQAT++EIA + +A+L K+ A+ G++ EQIE D R + + EA EYG+ID+V+ EK Sbjct: 120 VMIHQPLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEYGLIDEVMQPEK 194
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_PSEF5 (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=clpP PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 216 +MI QP+G +GQA+D+EI KE+ ++ L L AKH G+T E+IE D R + S A EYG+ID+V+ Sbjct: 136 VMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAREYGLIDEVI 206
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_PHOPR (ATP-dependent Clp protease proteolytic subunit OS=Photobacterium profundum GN=clpP PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 216 +MI QP+G +GQA+D++I KE+ +K L L AKH G+ E +E D R + S +AVEYG++D VL Sbjct: 125 VMIHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTDRDNFMSADQAVEYGLVDSVL 195
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_DECAR (ATP-dependent Clp protease proteolytic subunit OS=Dechloromonas aromatica (strain RCB) GN=clpP PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12 Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 216 +MI QP+G +GQA+D+ I KE+ +++ L ++ A+H G+ E+IE D R + S +EA EYG+IDKVL Sbjct: 133 VMIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEAAEYGLIDKVL 203
BLAST of CX299908 vs. ExPASy Swiss-Prot
Match: CLPP_AZOBR (ATP-dependent Clp protease proteolytic subunit OS=Azospirillum brasilense GN=clpP PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12 Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 4 IMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHG 246 IMI QP G +GQA+D+EI +E+ +++ L +Y KH G++ + IEA + R K+ SP EA +G+ID+V+ EK P G Sbjct: 128 IMIHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAXMERDKFMSPEEAKAFGLIDEVV--EKRPGSIG 206 The following BLAST results are available for this feature:
BLAST of CX299908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299908 ID=CX299908; Name=CX299908; organism=Citrus clementina; type=EST; length=378bpback to top |