CX299919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF4_ARATH (Profilin-4 OS=Arabidopsis thaliana GN=PRO4 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.387e-45 Identity = 82/107 (76.64%), Postives = 95/107 (88.79%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 IIGHDGSVWAQS NFPQ KP+EIT IM DF+EPG LAPTG++L G KYMVIQGEP AVIRGKKG GG+TIKKT +++ G+Y+EP+TPGQCNM+VERLGDYLI+QGL Sbjct: 28 IIGHDGSVWAQSANFPQFKPQEITDIMKDFDEPGHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLIEQGL 134
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF_PRUAV (Profilin OS=Prunus avium PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.811e-45 Identity = 84/107 (78.50%), Postives = 95/107 (88.79%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+G DGSVW+QS FP KPEEI I+ D ++PGTLAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+T+KKT+ ALIIGIYDEP+TPGQCNMIVERLGDYLI+QGL Sbjct: 25 ILGQDGSVWSQSATFPAFKPEEIAAILKDLDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF2_MAIZE (Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.533e-44 Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+GHDG+ WAQS FP+ K E++ IM DF+EPG LAPTGL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKT AL++GIYDEPMTPGQCNM+VERLGDYL++QG+ Sbjct: 25 IVGHDGAAWAQSTAFPEFKTEDMANIMKDFDEPGHLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLLEQGM 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF3_ARATH (Profilin-3 OS=Arabidopsis thaliana GN=PRO3 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.827e-44 Identity = 79/107 (73.83%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+GHDGSVWAQS NFPQ K +E + IM DF+EPG LAPTGL++ G KYMVIQGEPGAVIRGKKG GG+TIKKT + + GIY+EP+TPGQCNM+VERLGDYL++QGL Sbjct: 28 IVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEPGHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLLEQGL 134
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF1_CITSI (Profilin OS=Citrus sinensis PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 5.827e-44 Identity = 82/107 (76.64%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+G DGSVW+QS FP + EEI I+ DF++PGTLAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+ +KKT+ ALIIGIYDEP+TPGQCNMIVERLGDYLI+QGL Sbjct: 25 ILGQDGSVWSQSATFPAFRLEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGIIVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF1_ARATH (Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 9.940e-44 Identity = 83/107 (77.57%), Postives = 91/107 (85.05%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+G DGSVWAQS FPQLKP+EI GI DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKGPGGVTIKKT+ AL+ G YDEPMT GQCN++VERLGDYLI+ L Sbjct: 25 ILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF3_AMBAR (Profilin-3 OS=Ambrosia artemisiifolia GN=D03 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.298e-43 Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+GHDG+VWAQS NFPQ KPEE+ GI+ +F++ GTLAPTG+++ G KYMV+QGE GAVIRGKKG GG+ IKKT AL++GIYDEP+ PGQCNM+VERLGDYLIDQG+ Sbjct: 27 ILGHDGTVWAQSSNFPQFKPEEMKGIITEFDQAGTLAPTGMFIAGAKYMVLQGEQGAVIRGKKGAGGICIKKTGQALVMGIYDEPVAPGQCNMVVERLGDYLIDQGM 133
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF2_ARATH (Profilin-2 OS=Arabidopsis thaliana GN=PRO2 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.214e-43 Identity = 83/107 (77.57%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I G DGSVWAQS FPQLKP EI GI DF E G LAPTGL+LGG KYMV+QGE GAVIRGKKGPGGVTIKKT+ AL+ GIYDEPMT GQCN++VERLGDYLI+ GL Sbjct: 25 IFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESGL 131
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF_BRANA (Profilin OS=Brassica napus PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.892e-43 Identity = 80/107 (74.77%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I GHDGSVWAQS NFPQ K +E IM DF+EPG LAPTGL+L G KYMVIQGEPGAVIRGKKG GG+TIKKT + + GIY+EP+TPGQCNM+VERLGDYLI+Q L Sbjct: 28 IFGHDGSVWAQSANFPQFKGQEFANIMKDFDEPGHLAPTGLFLAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLIEQDL 134
BLAST of CX299919 vs. ExPASy Swiss-Prot
Match: PROF2_ARTVU (Profilin-2 OS=Artemisia vulgaris PE=1 SV=3) HSP 1 Score: 173.326 bits (438), Expect = 8.414e-43 Identity = 77/107 (71.96%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 1 IIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 321 I+G DG+VWA+S+ FP+ KPEE+ GI+N+FNE GTLAPTGL+LGG KYMV+QGE GAVIRGKKG GG+ IKKT A+++GIYDEP+ PGQCNMIVERLGDYL+DQ + Sbjct: 27 ILGLDGTVWAKSDKFPEFKPEEMKGIINEFNEVGTLAPTGLFLGGAKYMVLQGEAGAVIRGKKGAGGICIKKTGQAMVMGIYDEPVAPGQCNMIVERLGDYLVDQNM 133 The following BLAST results are available for this feature:
BLAST of CX299919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299919 ID=CX299919; Name=CX299919; organism=Citrus clementina; type=EST; length=613bpback to top |