CX299921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULTO (50S ribosomal protein L2P OS=Sulfolobus tokodaii GN=rpl2p PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.448e-14 Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 1 NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 N Y K++VK WP VRGVAMN V HPHGGG HQ + STV R+APPG+KVG I Sbjct: 173 NNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_METS5 (50S ribosomal protein L2P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl2p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.454e-14 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 1 NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 N Y K++VK WP VRGVAMN V HPHGGG HQ + +STV R+ PPG+KVG I Sbjct: 173 NNYWKYKVKATKWPDVRGVAMNVVSHPHGGGLHQSVSRSSTVARNTPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULAC (50S ribosomal protein L2P OS=Sulfolobus acidocaldarius GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.123e-14 Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 1 NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 N Y K+RV+ WP VRGVAMN V HPHGGG HQ + STV R+APPG+KVG I Sbjct: 173 NNYWKYRVRAVKWPVVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULSO (50S ribosomal protein L2P OS=Sulfolobus solfataricus GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 175 YWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULIY (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 175 YWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULIN (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 175 YWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULIM (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 175 YWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULIL (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 175 YWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULIK (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 175 YWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_SULIA (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.303e-14 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y K++VK WP VRGVAMN V+HPHGGG HQ + STV R+APPG+KVG I Sbjct: 175 YWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227 The following BLAST results are available for this feature:
BLAST of CX299921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299921 ID=CX299921; Name=CX299921; organism=Citrus clementina; type=EST; length=401bpback to top |