CX299921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_NATPD (50S ribosomal protein L2P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl2p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 1 NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 159 N +HK + + WP+VRGVAMN V+HP GGG QH G +V RD PPG+KVG Sbjct: 175 NKHHKMKSRGGKWPRVRGVAMNAVDHPFGGGGRQHPGKPKSVSRDTPPGRKVG 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_METS3 (50S ribosomal protein L2P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl2p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.754e-12 Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 1 NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 N +H ++ K + VRGVAMN V+HPHGGGN QH G +TV R APPG+KVG I Sbjct: 178 NRWHAYKAKGKKFMTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSI 232
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_THEVO (50S ribosomal protein L2P OS=Thermoplasma volcanium GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 10 HKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 159 H R K VRGVAMN V HPHGGGNHQH+G STV R+APPG+KVG Sbjct: 172 HYLRSKAKRPYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 10 HKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 159 H R K VRGVAMN V HPHGGGNHQH+G STV R+APPG+KVG Sbjct: 172 HYLRSKAKRPYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_HALWD (50S ribosomal protein L2P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 159 +HK + + WP+VRGVAMN V+HP GGG QH G +V RDAPPG+KVG Sbjct: 177 HHKMKARGIKWPRVRGVAMNAVDHPFGGGGRQHPGQPKSVSRDAPPGRKVG 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_HALSA (50S ribosomal protein L2P OS=Halobacterium salinarium GN=rpl2p PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 1 NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 159 N +HK + + WP+VRGVAMN V+HP GGG QH G +V RDA PG+KVG Sbjct: 175 NKHHKMKARGTKWPRVRGVAMNAVDHPFGGGGRQHPGRPKSVSRDAAPGRKVG 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_HALS3 (50S ribosomal protein L2P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12 Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 1 NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 159 N +HK + + WP+VRGVAMN V+HP GGG QH G +V RDA PG+KVG Sbjct: 175 NKHHKMKARGTKWPRVRGVAMNAVDHPFGGGGRQHPGRPKSVSRDAAPGRKVG 227
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_METTP (50S ribosomal protein L2P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 1 Query: 4 AYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 +++K+R K WP+VRGVAMN V+HP GGG QH G TV R PPG+KVG I Sbjct: 175 SFYKYRSKAVKWPRVRGVAMNAVDHPFGGGGRQHPGRPKTVSRGTPPGRKVGSI 228
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_METKA (50S ribosomal protein L2P OS=Methanopyrus kandleri GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 Y+ R K WPKVRGVAMN V+HP GGGNHQ G +T+ R PPG+KVG I Sbjct: 180 YYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKVGHI 232
BLAST of CX299921 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 7 YHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 165 YHK + + +P+V GVAMNPV+HP GGG +H G +TV R+APPG+KVGLI Sbjct: 177 YHKMKTRAAKYPRVSGVAMNPVDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229 The following BLAST results are available for this feature:
BLAST of CX299921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299921 ID=CX299921; Name=CX299921; organism=Citrus clementina; type=EST; length=401bpback to top |