CX299925

Overview
NameCX299925
Unique NameCX299925
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX299925 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.502e-25
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 3 
Query:    3 IDYFPSRYDPVRHAEMH-PTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 311
            +DY+PSR+ P+R A    P PP    GRREK  I K N+FKQPGERYRSW  DRQ+RF+ R+ D+L  P+V+ E+R IWI   ++   SLG K+A+RLN++ N+
Sbjct:  393 VDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVSQELRSIWIDLLAKCDASLGMKIATRLNMKANM 496
The following BLAST results are available for this feature:
BLAST of CX299925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA3_MAIZE2.502e-2551.92Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC07004A12SK SaltLeaf1 Citrus clementina cDNA clone C07004A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299925 ID=CX299925; Name=CX299925; organism=Citrus clementina; type=EST; length=522bp
AGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGATG
CATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATAAT
TCCAAAGGAAAACAACTTCAAACAACCTGGAGAGAGATACCGATCTTGGG
CACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTATCT
GATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGGTC
TCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGTGA
GGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTTAG
CAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCGTT
TTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCTGT
AATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTGTACGCTCAAA
ATTTGTATAAAGTACAATCATA
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